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  5. lcl|BLLF01002194.1_cds_GFH23106.1_17583

lcl|BLLF01002194.1_cds_GFH23106.1_17583 (HaLaN_20667, GFH23106)


Aliases : HaLaN_20667, GFH23106

Description : Zinc finger, C3HC4 type (RING finger) [Interproscan].


Gene families : OG_01_0004043 (OrthoFinder) Phylogenetic Tree(s): OG0004043_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01002194.1_cds_GFH23106.1_17583
Cluster HCCA: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001024.15 tig00001024_g6324.t1 E3 ubiquitin-protein ligase ORTHRUS 2 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cz03g08240.t1 No alias SRA-YDG; Zinc finger, C3HC4 RING-type; RING-type... 0.01 OrthoFinder
Dusal.0767s00006.1 33187777 RING-type zinc-finger, LisH dimerisation motif; SRA-YDG;... 0.01 OrthoFinder
Sro3451_g348170.1 Contig924.g9696 Postreplication repair E3 ubiquitin-protein ligase RAD18 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!