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Aliases : HaLaN_20520, GFH22976
Description : Regulator of nonsense transcripts 1
Gene families : OG_01_0005132 (OrthoFinder) Phylogenetic Tree(s): OG0005132_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|BLLF01002165.1_cds_GFH22976.1_17453 | |
| Cluster | HCCA: Cluster_111 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| lcl|BLLF01001276.1_cds_GFH18281.1_12758 | HaLaN_15055, GFH18281 | TRNA-splicing endonuclease positive effector | 0.04 | OrthoFinder | |
| lcl|BLLF01004313.1_cds_GFH29367.1_23844 | HaLaN_28013, GFH29367 | Hypothetical protein | 0.03 | OrthoFinder | |
| lcl|BLLF01004313.1_cds_GFH29368.1_23845 | HaLaN_28014, GFH29368 | TRNA-splicing endonuclease positive effector | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004512 | inositol-3-phosphate synthase activity | IEP | Enrichment |
| BP | GO:0006020 | inositol metabolic process | IEP | Enrichment |
| BP | GO:0006021 | inositol biosynthetic process | IEP | Enrichment |
| BP | GO:0006066 | alcohol metabolic process | IEP | Enrichment |
| BP | GO:0006644 | phospholipid metabolic process | IEP | Enrichment |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Enrichment |
| MF | GO:0008171 | O-methyltransferase activity | IEP | Enrichment |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | Enrichment |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Enrichment |
| BP | GO:0015994 | chlorophyll metabolic process | IEP | Enrichment |
| BP | GO:0015995 | chlorophyll biosynthetic process | IEP | Enrichment |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Enrichment |
| MF | GO:0016872 | intramolecular lyase activity | IEP | Enrichment |
| BP | GO:0019751 | polyol metabolic process | IEP | Enrichment |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Enrichment |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Enrichment |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Enrichment |
| BP | GO:0042440 | pigment metabolic process | IEP | Enrichment |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Enrichment |
| BP | GO:0046148 | pigment biosynthetic process | IEP | Enrichment |
| BP | GO:0046165 | alcohol biosynthetic process | IEP | Enrichment |
| BP | GO:0046173 | polyol biosynthetic process | IEP | Enrichment |
| MF | GO:0046406 | magnesium protoporphyrin IX methyltransferase activity | IEP | Enrichment |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | Enrichment |
| BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR041679 | DNA2/NAM7-like_C | 41 | 205 |
| No external refs found! |