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Aliases : HaLaN_20314, GFH22799
Description : TraB domain-containing protein
Gene families : OG_01_0000457 (OrthoFinder) Phylogenetic Tree(s): OG0000457_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|BLLF01002126.1_cds_GFH22799.1_17276 | |
| Cluster | HCCA: Cluster_262 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre16.g677800 | 30777487 | No description available | 0.03 | OrthoFinder | |
| OT_05G03100.1 | No alias | TraB family [Interproscan]. | 0.02 | OrthoFinder | |
| Sro1472_g275540.1 | Contig2029.g17426 | TraB domain containing | 0.02 | OrthoFinder | |
| Sro1902_g304460.1 | Contig632.g7672 | TraB family | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004126 | cytidine deaminase activity | IEP | Enrichment |
| BP | GO:0006213 | pyrimidine nucleoside metabolic process | IEP | Enrichment |
| BP | GO:0006216 | cytidine catabolic process | IEP | Enrichment |
| BP | GO:0009116 | nucleoside metabolic process | IEP | Enrichment |
| BP | GO:0009119 | ribonucleoside metabolic process | IEP | Enrichment |
| BP | GO:0009164 | nucleoside catabolic process | IEP | Enrichment |
| BP | GO:0009972 | cytidine deamination | IEP | Enrichment |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Enrichment |
| MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Enrichment |
| MF | GO:0019239 | deaminase activity | IEP | Enrichment |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | Enrichment |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Enrichment |
| BP | GO:0034656 | nucleobase-containing small molecule catabolic process | IEP | Enrichment |
| BP | GO:0042454 | ribonucleoside catabolic process | IEP | Enrichment |
| BP | GO:0044248 | cellular catabolic process | IEP | Enrichment |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Enrichment |
| BP | GO:0044282 | small molecule catabolic process | IEP | Enrichment |
| BP | GO:0046087 | cytidine metabolic process | IEP | Enrichment |
| BP | GO:0046131 | pyrimidine ribonucleoside metabolic process | IEP | Enrichment |
| BP | GO:0046133 | pyrimidine ribonucleoside catabolic process | IEP | Enrichment |
| BP | GO:0046135 | pyrimidine nucleoside catabolic process | IEP | Enrichment |
| BP | GO:0046700 | heterocycle catabolic process | IEP | Enrichment |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0072529 | pyrimidine-containing compound catabolic process | IEP | Enrichment |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | Enrichment |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Enrichment |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Enrichment |
| BP | GO:1901657 | glycosyl compound metabolic process | IEP | Enrichment |
| BP | GO:1901658 | glycosyl compound catabolic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002816 | TraB/PrgY/GumN_fam | 6 | 91 |
| No external refs found! |