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  5. lcl|BLLF01002081.1_cds_GFH22613.1_17090

lcl|BLLF01002081.1_cds_GFH22613.1_17090 (HaLaN_20107, GFH22613)


Aliases : HaLaN_20107, GFH22613

Description : Elongation factor P, C-terminal; Translation elongation factor P/YeiP, central [Interproscan].


Gene families : OG_01_0001087 (OrthoFinder) Phylogenetic Tree(s): OG0001087_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01002081.1_cds_GFH22613.1_17090
Cluster HCCA: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
PTI_31G00220.1 No alias Translation elongation factor, KOW-like; Elongation... 0.02 OrthoFinder
Transcript_contig_56403 56403 Translation elongation factor P/YeiP, central;... 0.02 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494348.1_4212 KAA8494348 Elongation factor P 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006414 translational elongation IEA Interproscan
BP GO:0043043 peptide biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004478 methionine adenosyltransferase activity IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0046500 S-adenosylmethionine metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
InterPro domains Description Start Stop
IPR015365 Elong-fact-P_C 45 101
IPR001059 Transl_elong_P/YeiP_cen 1 37
No external refs found!