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  5. lcl|BLLF01002033.1_cds_GFH22403.1_16880

lcl|BLLF01002033.1_cds_GFH22403.1_16880 (HaLaN_19863, GFH22403)


Aliases : HaLaN_19863, GFH22403

Description : DNA primase large subunit, eukaryotic/archaeal [Interproscan].


Gene families : OG_01_0003034 (OrthoFinder) Phylogenetic Tree(s): OG0003034_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01002033.1_cds_GFH22403.1_16880
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020848.68 tig00020848_g14599.t1 Cell cycle.interphase.DNA replication.elongation.DNA... 0.05 OrthoFinder
Cre06.g293000 30779460, PRI2 Cell cycle.interphase.DNA replication.elongation.DNA... 0.03 OrthoFinder
Cz11g15130.t1 No alias DNA primase large subunit, eukaryotic/archaeal [Interproscan]. 0.06 OrthoFinder
Dusal.0802s00002.1 33199448 DNA primase large subunit, eukaryotic/archaeal [Interproscan]. 0.05 OrthoFinder
EOD09588 No alias DNA primase large subunit, eukaryotic/archaeal [Interproscan]. 0.04 OrthoFinder
OT_11G00950.1 No alias DNA primase large subunit, eukaryotic/archaeal [Interproscan]. 0.02 OrthoFinder
PTI_11G02500.1 No alias DNA primase large subunit, eukaryotic/archaeal [Interproscan]. 0.05 OrthoFinder
Sro1384_g268120.1 Contig2234.g18574 Primase large subunit 0.03 OrthoFinder
Transcript_contig_59530 59530 DNA primase large subunit, eukaryotic/archaeal [Interproscan]. 0.03 OrthoFinder
XM_002509034.1 MICPUN_98146, 98146 DNA primase large subunit, eukaryotic/archaeal [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW60925.1_36 PRW60925 Putative DNA primase large subunit 0.02 OrthoFinder
lcl|VRMN01000007.1_cds_KAA8493338.1_9639 KAA8493338 Putative DNA primase large subunit 0.04 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006269 DNA replication, synthesis of RNA primer IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
CC GO:0000444 MIS12/MIND type complex IEP Enrichment
BP GO:0000723 telomere maintenance IEP Enrichment
CC GO:0000808 origin recognition complex IEP Enrichment
CC GO:0000818 nuclear MIS12/MIND complex IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR007238 DNA_primase_lsu_euk/arc 14 282
No external refs found!