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  5. lcl|BLLF01002029.1_cds_GFH22381.1_16858

lcl|BLLF01002029.1_cds_GFH22381.1_16858 (HaLaN_19838, GFH22381)


Aliases : HaLaN_19838, GFH22381

Description : DNA polymerase


Gene families : OG_01_0002710 (OrthoFinder) Phylogenetic Tree(s): OG0002710_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01002029.1_cds_GFH22381.1_16858
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
Cre04.g214350 30791491 Cell cycle.interphase.DNA replication.elongation.DNA... 0.03 OrthoFinder
Cz12g08090.t1 No alias DNA-directed DNA polymerase, family B, multifunctional... 0.03 OrthoFinder
EOD27476 No alias DNA polymerase alpha subunit 1 [Ensembl]. 0.02 OrthoFinder
OT_08G00710.1 No alias DNA polymerase alpha catalytic subunit, N-terminal... 0.02 OrthoFinder
Sro49_g028720.1 Contig2054.g17622 DNA polymerase alpha catalytic subunit (Fragment) 0.01 OrthoFinder
Transcript_contig_54971 54971 DNA-directed DNA polymerase, family B, exonuclease... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Enrichment
CC GO:0000808 origin recognition complex IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR006133 DNA-dir_DNA_pol_B_exonuc 25 229
No external refs found!