- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : HaLaN_19706, GFH22265
Description : Tetratricopeptide repeat [Interproscan].
Gene families : OG_01_0003295 (OrthoFinder) Phylogenetic Tree(s): OG0003295_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|BLLF01002003.1_cds_GFH22265.1_16742 | |
| Cluster | HCCA: Cluster_81 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| OT_04G04430.1 | No alias | Tetratricopeptide repeat [Interproscan]. | 0.02 | OrthoFinder | |
| XM_003055282.1 | MicpuC2_49825, 49825 | Hypothetical protein | 0.01 | OrthoFinder | |
| lcl|BLLF01002003.1_cds_GFH22266.1_16743 | HaLaN_19707, GFH22266 | TPR_REGION domain-containing protein | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000226 | microtubule cytoskeleton organization | IEP | Enrichment |
| MF | GO:0003682 | chromatin binding | IEP | Enrichment |
| MF | GO:0003756 | protein disulfide isomerase activity | IEP | Enrichment |
| MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Enrichment |
| CC | GO:0005783 | endoplasmic reticulum | IEP | Enrichment |
| CC | GO:0005815 | microtubule organizing center | IEP | Enrichment |
| BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | IEP | Enrichment |
| BP | GO:0007010 | cytoskeleton organization | IEP | Enrichment |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Enrichment |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Enrichment |
| MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | Enrichment |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016864 | intramolecular oxidoreductase activity, transposing S-S bonds | IEP | Enrichment |
| BP | GO:0022900 | electron transport chain | IEP | Enrichment |
| BP | GO:0034453 | microtubule anchoring | IEP | Enrichment |
| BP | GO:0048193 | Golgi vesicle transport | IEP | Enrichment |
| MF | GO:0070001 | aspartic-type peptidase activity | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR019734 | TPR_repeat | 29 | 58 |
| No external refs found! |