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  5. lcl|BLLF01001955.1_cds_GFH22041.1_16518

lcl|BLLF01001955.1_cds_GFH22041.1_16518 (HaLaN_19442, GFH22041)


Aliases : HaLaN_19442, GFH22041

Description : S1 domain [Interproscan].


Gene families : OG_01_0000317 (OrthoFinder) Phylogenetic Tree(s): OG0000317_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01001955.1_cds_GFH22041.1_16518
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
lcl|BLLF01000036.1_cds_GFH06379.1_856 HaLaN_01000, GFH06379 Hypothetical protein 0.05 OrthoFinder
lcl|BLLF01000045.1_cds_GFH06563.1_1040 HaLaN_01214, GFH06563 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01002058.1_cds_GFH22522.1_16999 HaLaN_19996, GFH22522 Hypothetical protein 0.05 OrthoFinder
lcl|BLLF01002652.1_cds_GFH24859.1_19336 HaLaN_22726, GFH24859 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01004114.1_cds_GFH28945.1_23422 HaLaN_27520, GFH28945 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01004119.1_cds_GFH28957.1_23434 HaLaN_27535, GFH28957 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01004633.1_cds_GFH29988.1_24465 HaLaN_28753, GFH29988 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01007022.1_cds_GFH32717.1_27194 HaLaN_31982, GFH32717 Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000725 recombinational repair IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
MF GO:0033897 ribonuclease T2 activity IEP Enrichment
InterPro domains Description Start Stop
IPR003029 S1_domain 3 56
No external refs found!