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  5. lcl|BLLF01001898.1_cds_GFH21752.1_16229

lcl|BLLF01001898.1_cds_GFH21752.1_16229 (HaLaN_19115, GFH21752)


Aliases : HaLaN_19115, GFH21752

Description : ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain [Interproscan].


Gene families : OG_01_0000083 (OrthoFinder) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01001898.1_cds_GFH21752.1_16229
Cluster HCCA: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
Cre09.g398550 30781371 Cell division control protein 48 homolog C... 0.02 OrthoFinder
Cre17.g700300 30781628, CGL22 Cell division control protein 48 homolog B... 0.02 OrthoFinder
EOD18732 No alias AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core... 0.01 OrthoFinder
OT_17G01910.1 No alias ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;... 0.04 OrthoFinder
Sro287_g108550.1 Contig252.g3096 Transitional endoplasmic reticulum ATPase 0.01 OrthoFinder
SymbC1.scaffold339.14 339.14 ATPase, AAA-type, core [Interproscan]. 0.01 OrthoFinder
Vocar.0021s0058.1 32896069 ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... 0.02 OrthoFinder
XM_002500797.1 MICPUN_79795, 79795 AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core... 0.02 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57417.1_8902 PRW57417 Ribosome biogenesis ATPase RIX7 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003724 RNA helicase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR041569 AAA_lid_3 329 366
IPR003959 ATPase_AAA_core 200 307
IPR003959 ATPase_AAA_core 8 126
No external refs found!