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  5. Cpa|evm.model.tig00021493.69

Cpa|evm.model.tig00021493.69 (tig00021493_g21908.t1)


Aliases : tig00021493_g21908.t1

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL36 component


Gene families : OG_01_0003108 (OrthoFinder) Phylogenetic Tree(s): OG0003108_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021493.69
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Cre12.g484050 30792099, RPL36 Protein biosynthesis.cytosolic ribosome.large subunit... 0.25 OrthoFinder
Cz06g33040.t1 No alias Ribosomal protein L36e [Interproscan]. 0.22 OrthoFinder
Dusal.1916s00002.1 33187807 Ribosomal protein L36e [Interproscan]. 0.07 OrthoFinder
EOD30407 No alias Ribosomal protein L36e [Interproscan]. 0.17 OrthoFinder
OT_02G00860.1 No alias Ribosomal protein L36e [Interproscan]. 0.12 OrthoFinder
PTI_04G00610.1 No alias Ribosomal protein L36e [Interproscan]. 0.27 OrthoFinder
Sro327_g118470.1 Contig839.g9255 60S ribosomal protein L36 0.28 OrthoFinder
SymbC1.scaffold1291.12 1291.12 Ribosomal protein L36e [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold1291.13 1291.13 Ribosomal protein L36e [Interproscan]. 0.06 OrthoFinder
TP04G05720.1 No alias Ribosomal protein L36e [Interproscan]. 0.26 OrthoFinder
Vocar.0031s0112.1 32890137 Ribosomal protein L36e [Interproscan]. 0.17 OrthoFinder
XM_002507094.1 MICPUN_114038, 114038 60S ribosomal protein L36 (RPL36) 0.15 OrthoFinder
XM_003056471.1 MicpuC2_31782, 31782 60S ribosomal protein L36 (RPL36) 0.04 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56617.1_9463 PRW56617 60S ribosomal L36-3-like 0.13 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499503.1_8456 KAA8499503 60S ribosomal protein L36-1 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000509 Ribosomal_L36e 5 98
No external refs found!