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  5. lcl|BLLF01001849.1_cds_GFH21535.1_16012

lcl|BLLF01001849.1_cds_GFH21535.1_16012 (HaLaN_18860, GFH21535)


Aliases : HaLaN_18860, GFH21535

Description : Chlorophyll a-b binding protein, chloroplastic


Gene families : OG_01_0000013 (OrthoFinder) Phylogenetic Tree(s): OG0000013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01001849.1_cds_GFH21535.1_16012
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Cre03.g156900 30787808, LHCBM5 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder
Cre04.g232104 30791553, LHCBM3 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder
Cre06.g272650 30779881, LHCA8 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.05 OrthoFinder
Cre06.g278213 30779171, LHCA6 Chlorophyll a-b binding protein P4, chloroplastic... 0.06 OrthoFinder
Cre06.g283050 30779127, LHCA1 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.06 OrthoFinder
Cre06.g283950 30779716, LHCBM4 Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder
Cre06.g284250 30779962, LHCBM8 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder
Cre06.g285250 30779463, LHCBM6 Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder
Cre07.g344950 30774737, LHCA9 Photosystem I chlorophyll a/b-binding protein 5,... 0.07 OrthoFinder
Cre10.g425900 30790196, LHCA5 Chlorophyll a-b binding protein 4, chloroplastic... 0.06 OrthoFinder
Cre10.g452050 30790835, LHCA4 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.06 OrthoFinder
Cre11.g467573 30776039, LHCA3 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.07 OrthoFinder
Cre12.g508750 30791684, LHCA2 Photosystem I chlorophyll a/b-binding protein 6,... 0.05 OrthoFinder
Cre12.g548950 30793494, LHCBM7 Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder
Cre16.g673650 30777655, LHCB5 Photosynthesis.photophosphorylation.photosystem... 0.06 OrthoFinder
Cre16.g687900 30778224, LHCA7 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.09 OrthoFinder
Cre17.g720250 30782643, LHCB4 Photosynthesis.photophosphorylation.photosystem... 0.06 OrthoFinder
Cz01g23030.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.08 OrthoFinder
Cz02g14140.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
Cz03g26240.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.08 OrthoFinder
Cz04g04130.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.08 OrthoFinder
Cz04g09210.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.06 OrthoFinder
Cz07g02100.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Cz08g11160.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.07 OrthoFinder
Cz09g32070.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.07 OrthoFinder
Cz10g10160.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.08 OrthoFinder
Cz12g16070.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.08 OrthoFinder
Cz13g03240.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Cz15g09060.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Cz15g17110.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Cz16g14150.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.08 OrthoFinder
Dusal.0027s00003.1 33191533 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Dusal.0048s00036.1 33189483 Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Dusal.0048s00039.1 33189457 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Dusal.0125s00005.1 33191827 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Dusal.0152s00006.1 33186191 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Dusal.0388s00006.1 33197668 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
OT_01G04980.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
PTI_20G01950.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
Sro975_g226790.1 Contig3918.g30025 B binding protein CP29 0.01 OrthoFinder
Sro98_g050410.1 Contig3362.g26333 Chloroplastic 0.01 OrthoFinder
Transcript_contig_59040 59040 Chlorophyll A-B binding protein [Interproscan]. 0.06 OrthoFinder
Transcript_contig_79146 79146 Chlorophyll A-B binding protein [Interproscan]. 0.07 OrthoFinder
Transcript_contig_79793 79793 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Transcript_contig_90701 90701 Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
UNPLg00080.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.09 OrthoFinder
Vocar.0002s0071.1 32890569 Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
Vocar.0002s0281.1 32890560 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Vocar.0002s0333.1 32890723 Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
Vocar.0005s0361.1 32883819 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Vocar.0009s0370.1 32893259 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Vocar.0011s0017.1 32895358 Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Vocar.0016s0243.1 32897935 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Vocar.0018s0037.1 32898532 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Vocar.0021s0124.1 32896004 Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
Vocar.0023s0180.1 32883354 Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Vocar.0028s0157.1 32895586 Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
XM_003054893.1 MicpuC2_45156, 45156 Prasinophyte specific chlorophyll a/b-binding protein,... 0.02 OrthoFinder
XM_003055426.1 MicpuC2_46212, 46212 Prasinophyte specific chlorophyll a/b-binding protein (LHCP2.7) 0.02 OrthoFinder
XM_003056380.1 MicpuC2_45265, 45265 Prasinophyte specific chlorophyll a/b-binding protein,... 0.03 OrthoFinder
XM_003056382.1 MicpuC2_70884, 70884 Chlorophyll a/b-binding protein, chloroplast precursor (LHCA2) 0.08 OrthoFinder
XM_003057791.1 MicpuC2_57460, 57460 Prasinophyte specific chlorophyll a/b-binding protein,... 0.02 OrthoFinder
XM_003063485.1 MicpuC2_70908, 70908 Chlorophyll a/b-binding protein CP29, chloroplast... 0.04 OrthoFinder
XM_003063603.1 MicpuC2_36592, 36592 Chlorophyll a/b-binding protein CP26, chloroplast... 0.05 OrthoFinder
XM_003064530.1 MicpuC2_46049, 46049 Chlorophyll a/b-binding protein, psi-associated,... 0.02 OrthoFinder
lcl|BLLF01000742.1_cds_GFH14568.1_9045 HaLaN_10649, GFH14568 Chlorophyll a-b binding protein, chloroplastic 0.03 OrthoFinder
lcl|BLLF01000768.1_cds_GFH14802.1_9279 HaLaN_10920, GFH14802 Chlorophyll a-b binding protein, chloroplastic 0.05 OrthoFinder
lcl|BLLF01001360.1_cds_GFH18804.1_13281 HaLaN_15665, GFH18804 Chlorophyll a-b binding protein, chloroplastic 0.04 OrthoFinder
lcl|BLLF01001662.1_cds_GFH20585.1_15062 HaLaN_17731, GFH20585 Chlorophyll a-b binding protein, chloroplastic 0.08 OrthoFinder
lcl|BLLF01002496.1_cds_GFH24298.1_18775 HaLaN_22066, GFH24298 Chlorophyll a-b binding protein, chloroplastic 0.04 OrthoFinder
lcl|BLLF01002822.1_cds_GFH25467.1_19944 HaLaN_23439, GFH25467 Chlorophyll a-b binding protein, chloroplastic 0.05 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61161.1_400 PRW61161 Chlorophyll a b binding CP29 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61250.1_625 PRW61250 Light-harvesting of photosystem I 0.03 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61582.1_286 PRW61582 Cytochrome b-c1 complex subunit Rieske-mitochondrial 0.04 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57333.1_9090 PRW57333 Chlorophyll a b-binding apo CP26 precursor 0.02 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56009.1_10248 PRW56009 Light-harvesting of photosystem I 0.03 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56118.1_10249 PRW56118 Light harvesting complex a 0.03 OrthoFinder
lcl|LHPG02000010.1_cds_PRW50945.1_980 PRW50945 Chlorophyll a b-binding 0.03 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45536.1_1258 PRW45536 Light-harvesting of photosystem I 0.03 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45697.1_1257 PRW45697 Light-harvesting of photosystem I 0.03 OrthoFinder
lcl|LHPG02000022.1_cds_PRW20612.1_5288 PRW20612 Chlorophyll a b-binding 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 45 106
No external refs found!