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Aliases : tig00021493_g21856.t1
Description : Cactin OS=Arabidopsis thaliana
Gene families : OG_01_0001804 (OrthoFinder) Phylogenetic Tree(s): OG0001804_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00021493.13 | |
| Cluster | HCCA: Cluster_144 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre09.g398650 | 30780362 | Cactin OS=Arabidopsis thaliana | 0.02 | OrthoFinder | |
| Dusal.0250s00021.1 | 33198078 | Cactin, C-terminal; Cactin, central domain [Interproscan]. | 0.02 | OrthoFinder | |
| EOD10712 | No alias | Cactin, central domain; Cactin, C-terminal [Interproscan]. | 0.02 | OrthoFinder | |
| OT_04G01440.1 | No alias | Cactin, C-terminal; Cactin, central domain [Interproscan]. | 0.02 | OrthoFinder | |
| Transcript_contig_59008 | 59008 | Cactin, C-terminal [Interproscan]. | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Enrichment |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Enrichment |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Enrichment |
| CC | GO:0005681 | spliceosomal complex | IEP | Enrichment |
| CC | GO:0005789 | endoplasmic reticulum membrane | IEP | Enrichment |
| BP | GO:0006397 | mRNA processing | IEP | Enrichment |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Enrichment |
| BP | GO:0006605 | protein targeting | IEP | Enrichment |
| BP | GO:0006612 | protein targeting to membrane | IEP | Enrichment |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Enrichment |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Enrichment |
| MF | GO:0008312 | 7S RNA binding | IEP | Enrichment |
| BP | GO:0008380 | RNA splicing | IEP | Enrichment |
| BP | GO:0016071 | mRNA metabolic process | IEP | Enrichment |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Enrichment |
| CC | GO:0031090 | organelle membrane | IEP | Enrichment |
| BP | GO:0033365 | protein localization to organelle | IEP | Enrichment |
| BP | GO:0034613 | cellular protein localization | IEP | Enrichment |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0045047 | protein targeting to ER | IEP | Enrichment |
| CC | GO:0048500 | signal recognition particle | IEP | Enrichment |
| BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Enrichment |
| BP | GO:0051668 | localization within membrane | IEP | Enrichment |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Enrichment |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Enrichment |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | Enrichment |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Enrichment |
| BP | GO:0072657 | protein localization to membrane | IEP | Enrichment |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | Enrichment |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Enrichment |
| No external refs found! |