lcl|BLLF01001733.1_cds_GFH20962.1_15439 (HaLaN_18173, GFH20962)

Aliases : HaLaN_18173, GFH20962

Description : Sec23/Sec24 beta-sandwich; Sec23/Sec24, trunk domain [Interproscan].

Gene families : OG_01_0000893 (OrthoFinder) Phylogenetic Tree(s): OG0000893_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: lcl|BLLF01001733.1_cds_GFH20962.1_15439
Cluster HCCA: Cluster_264

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold2378.2 2378.2 Zinc finger, Sec23/Sec24-type; Sec23/Sec24... 0.01 OrthoFinder
XM_003061771.1 MicpuC2_28751, 28751 Gelsolin-like domain; Sec23/Sec24, helical domain;... 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEA Interproscan
CC GO:0030127 COPII vesicle coat IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003756 protein disulfide isomerase activity IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR012990 Sec23_24_beta_S 302 388
IPR006896 Sec23/24_trunk_dom 63 296
No external refs found!