lcl|BLLF01001681.1_cds_GFH20695.1_15172 (HaLaN_17859, GFH20695)


Aliases : HaLaN_17859, GFH20695

Description : DNA replication factor C complex subunit 5


Gene families : OG_01_0002295 (OrthoFinder) Phylogenetic Tree(s): OG0002295_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01001681.1_cds_GFH20695.1_15172
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
Cre12.g527300 30793001, RFC5 Cell cycle.interphase.DNA... 0.02 OrthoFinder
EOD08878 No alias Putative replication factor C subunit 5 [Ensembl]. 0.02 OrthoFinder
Sro793_g203250.1 Contig534.g6933 Factor C small subunit 0.02 OrthoFinder
Vocar.0037s0052.1 32897481 ATPase, AAA-type, core; Replication factor C, C-terminal... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 68 185
No external refs found!