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  5. lcl|BLLF01001677.1_cds_GFH20669.1_15146

lcl|BLLF01001677.1_cds_GFH20669.1_15146 (HaLaN_17828, GFH20669)


Aliases : HaLaN_17828, GFH20669

Description : Signal recognition particle 54 kDa protein


Gene families : OG_01_0003509 (OrthoFinder) Phylogenetic Tree(s): OG0003509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01001677.1_cds_GFH20669.1_15146
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
EOD34649 No alias Signal recognition particle, SRP54 subunit, M-domain;... 0.02 OrthoFinder
PTI_11G03650.1 No alias Signal recognition particle, SRP54 subunit, M-domain;... 0.01 OrthoFinder
Vocar.0001s0272.1 32886173 Signal recognition particle, SRP54 subunit, M-domain;... 0.02 OrthoFinder
XM_002504313.1 MICPUN_85222, 85222 Type II secretory pathway family (SRP54.2) 0.02 OrthoFinder
XM_003064794.1 MicpuC2_23850, 23850 Type II secretory pathway family protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
MF GO:0008184 glycogen phosphorylase activity IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
BP GO:0015689 molybdate ion transport IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR000897 SRP54_GTPase_dom 105 299
IPR013822 Signal_recog_particl_SRP54_hlx 6 83
No external refs found!