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Aliases : tig00000169_g11878.t1
Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RACK1 associated component
Gene families : OG_01_0002731 (OrthoFinder) Phylogenetic Tree(s): OG0002731_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00000169.6 | |
| Cluster | HCCA: Cluster_43 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre06.g278222 | 30778664, RCK1 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.17 | OrthoFinder | |
| Cz04g00190.t1 | No alias | WD40 repeat [Interproscan]. | 0.12 | OrthoFinder | |
| Dusal.0241s00008.1 | 33190252 | WD40 repeat [Interproscan]. | 0.08 | OrthoFinder | |
| EOD05714 | No alias | Receptor of activated protein kinase C [Ensembl]. | 0.03 | OrthoFinder | |
| EOD14372 | No alias | Receptor of activated protein kinase C [Ensembl]. | 0.03 | OrthoFinder | |
| OT_13G01530.1 | No alias | WD40 repeat [Interproscan]. | 0.11 | OrthoFinder | |
| PTI_13G02390.1 | No alias | WD40 repeat [Interproscan]. | 0.12 | OrthoFinder | |
| Sro925_g220910.1 | Contig3078.g24550 | Nucleotide-binding protein subunit beta-like protein | 0.18 | OrthoFinder | |
| TP01G03160.1 | No alias | WD40 repeat [Interproscan]. | 0.09 | OrthoFinder | |
| Vocar.0002s0308.1 | 32890609 | WD40 repeat [Interproscan]. | 0.1 | OrthoFinder | |
| XM_002502789.1 | MICPUN_94482, 94482 | WD40 repeat [Interproscan]. | 0.08 | OrthoFinder | |
| XM_003060906.1 | MicpuC2_28307, 28307 | WD40 repeat [Interproscan]. | 0.05 | OrthoFinder | |
| lcl|LHPG02000021.1_cds_PRW20811.1_5083 | PRW20811 | Receptor of activated kinase C component of 40S small... | 0.03 | OrthoFinder | |
| lcl|VRMN01000001.1_cds_KAA8499471.1_8424 | KAA8499471 | Guanine nucleotide-binding protein subunit beta-2-like 1 | 0.1 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Enrichment |
| MF | GO:0005198 | structural molecule activity | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005840 | ribosome | IEP | Enrichment |
| BP | GO:0006412 | translation | IEP | Enrichment |
| BP | GO:0006518 | peptide metabolic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| MF | GO:0008716 | D-alanine-D-alanine ligase activity | IEP | Enrichment |
| BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Enrichment |
| MF | GO:0016881 | acid-amino acid ligase activity | IEP | Enrichment |
| BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
| MF | GO:0019842 | vitamin binding | IEP | Enrichment |
| MF | GO:0030976 | thiamine pyrophosphate binding | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Enrichment |
| MF | GO:0043169 | cation binding | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Enrichment |
| BP | GO:0043604 | amide biosynthetic process | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| MF | GO:0046872 | metal ion binding | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
| MF | GO:1901681 | sulfur compound binding | IEP | Enrichment |
| No external refs found! |