lcl|BLLF01001658.1_cds_GFH20565.1_15042 (HaLaN_17707, GFH20565)

Aliases : HaLaN_17707, GFH20565

Description : DEAD box RNA helicase CiRH11

Gene families : OG_01_0001367 (OrthoFinder) Phylogenetic Tree(s): OG0001367_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: lcl|BLLF01001658.1_cds_GFH20565.1_15042
Cluster HCCA: Cluster_293

Target Alias Description ECC score Gene Family Method Actions
Cre03.g200095 30787107 DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sativa... 0.02 OrthoFinder
EOD08244 No alias DEAD/DEAH box helicase domain [Interproscan]. 0.02 OrthoFinder
Vocar.0013s0112.1 32896230 DEAD/DEAH box helicase domain; Helicase, C-terminal... 0.02 OrthoFinder
XM_002506565.1 MICPUN_64594, 64594 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0004620 phospholipase activity IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0033897 ribonuclease T2 activity IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 103 201
No external refs found!