lcl|BLLF01001658.1_cds_GFH20564.1_15041 (HaLaN_17706, GFH20564)

Aliases : HaLaN_17706, GFH20564

Description : DEAD/DEAH box helicase domain [Interproscan].

Gene families : OG_01_0001367 (OrthoFinder) Phylogenetic Tree(s): OG0001367_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|BLLF01001658.1_cds_GFH20564.1_15041
Cluster	HCCA: Cluster_264

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00020544.5	tig00020544_g10485.t2	DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sativa...	0.02	OrthoFinder
Cre03.g200095	30787107	DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sativa...	0.03	OrthoFinder
OT_04G05300.1	No alias	Helicase, C-terminal; DEAD/DEAH box helicase domain...	0.03	OrthoFinder
TP09G02940.1	No alias	Helicase, C-terminal; DEAD/DEAH box helicase domain...	0.01	OrthoFinder
Vocar.0013s0112.1	32896230	DEAD/DEAH box helicase domain; Helicase, C-terminal...	0.01	OrthoFinder
lcl\|LHPG02000014.1_cds_PRW39067.1_2786	PRW39067	DEAD-box ATP-dependent RNA helicase 37-like isoform B	0.02	OrthoFinder
lcl\|VRMN01000008.1_cds_KAA8492906.1_2642	KAA8492906	ATP-dependent RNA helicase DDX3Y	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Enrichment
MF	GO:0003723	RNA binding	IEP	Enrichment
MF	GO:0003756	protein disulfide isomerase activity	IEP	Enrichment
CC	GO:0005783	endoplasmic reticulum	IEP	Enrichment
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	Enrichment
BP	GO:0016579	protein deubiquitination	IEP	Enrichment
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Enrichment
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Enrichment
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Enrichment
MF	GO:0016864	intramolecular oxidoreductase activity, transposing S-S bonds	IEP	Enrichment
BP	GO:0030001	metal ion transport	IEP	Enrichment
CC	GO:0030173	integral component of Golgi membrane	IEP	Enrichment
CC	GO:0031228	intrinsic component of Golgi membrane	IEP	Enrichment
CC	GO:0031300	intrinsic component of organelle membrane	IEP	Enrichment
CC	GO:0031301	integral component of organelle membrane	IEP	Enrichment
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Enrichment
BP	GO:0048193	Golgi vesicle transport	IEP	Enrichment
BP	GO:0070646	protein modification by small protein removal	IEP	Enrichment
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	103	283

External Links

No external refs found!