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  5. lcl|BLLF01001600.1_cds_GFH20235.1_14712

lcl|BLLF01001600.1_cds_GFH20235.1_14712 (HaLaN_17325, GFH20235)


Aliases : HaLaN_17325, GFH20235

Description : DNA helicase


Gene families : OG_01_0000321 (OrthoFinder) Phylogenetic Tree(s): OG0000321_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01001600.1_cds_GFH20235.1_14712
Cluster HCCA: Cluster_257

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000241.38 tig00000241_g20896.t1 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.02 OrthoFinder
Cpa|evm.model.tig00020918.5 tig00020918_g15883.t1 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.04 OrthoFinder
Cre03.g178650 30786765, MCM6 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.04 OrthoFinder
Cre10.g455850 30790894, MCM7 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.03 OrthoFinder
Cz01g28090.t1 No alias MCM, AAA-lid domain; MCM OB domain; MCM domain; Mcm6,... 0.02 OrthoFinder
Cz10g20280.t1 No alias MCM N-terminal domain; MCM, AAA-lid domain; MCM OB... 0.03 OrthoFinder
EOD16317 No alias MCM OB domain; MCM, AAA-lid domain; MCM N-terminal... 0.02 OrthoFinder
EOD19125 No alias MCM OB domain; MCM, AAA-lid domain; MCM N-terminal... 0.02 OrthoFinder
EOD29659 No alias MCM, AAA-lid domain; MCM domain [Interproscan]. 0.01 OrthoFinder
EOD29724 No alias MCM OB domain; MCM, AAA-lid domain; MCM N-terminal... 0.01 OrthoFinder
OT_01G02550.1 No alias MCM, AAA-lid domain; MCM OB domain; Mcm6, C-terminal... 0.01 OrthoFinder
Sro1053_g235850.1 Contig4118.g31456 Zygotic DNA replication licensing factor mcm3 0.01 OrthoFinder
Sro397_g134560.1 Contig157.g1794 Helicase MCM9 0.02 OrthoFinder
TP05G04710.1 No alias MCM, AAA-lid domain; MCM OB domain; MCM domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_56242 56242 MCM domain; MCM N-terminal domain; MCM OB domain [Interproscan]. 0.03 OrthoFinder
Transcript_contig_67540 67540 MCM, AAA-lid domain; MCM domain; MCM N-terminal domain;... 0.03 OrthoFinder
Vocar.0015s0342.1 32899062 MCM OB domain; MCM N-terminal domain; Mcm6, C-terminal... 0.01 OrthoFinder
Vocar.0028s0155.1 32895592 MCM, AAA-lid domain; MCM N-terminal domain; MCM OB... 0.02 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57124.1_9129 PRW57124 DNA replication licensing factor MCM7 0.02 OrthoFinder
lcl|LHPG02000018.1_cds_PRW33036.1_3726 PRW33036 DNA replication licensing factor Mcm6 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006270 DNA replication initiation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR001208 MCM_dom 25 246
IPR041562 MCM_lid 261 346
No external refs found!