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  5. lcl|BLLF01001581.1_cds_GFH20136.1_14613

lcl|BLLF01001581.1_cds_GFH20136.1_14613 (HaLaN_17213, GFH20136)


Aliases : HaLaN_17213, GFH20136

Description : Ribosome biogenesis protein NOP53


Gene families : OG_01_0005329 (OrthoFinder) Phylogenetic Tree(s): OG0005329_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01001581.1_cds_GFH20136.1_14613
Cluster HCCA: Cluster_264

Target Alias Description ECC score Gene Family Method Actions
Cre07.g348250 30775230 Ribosome biogenesis protein NOP53 OS=Arabidopsis thaliana 0.03 OrthoFinder
OT_03G05420.1 No alias Ribosome biogenesis protein Nop53/GLTSCR2 [Interproscan]. 0.02 OrthoFinder
Transcript_contig_89559 89559 Ribosome biogenesis protein Nop53/GLTSCR2 [Interproscan]. 0.02 OrthoFinder
UNPLg00327.t1 No alias Ribosome biogenesis protein Nop53/GLTSCR2 [Interproscan]. 0.04 OrthoFinder
XM_003054787.1 MicpuC2_49936, 49936 Nucleolar protein (Nop53) 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
InterPro domains Description Start Stop
IPR011687 Nop53/GLTSCR2 6 100
IPR011687 Nop53/GLTSCR2 135 341
No external refs found!