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  5. lcl|BLLF01001573.1_cds_GFH20092.1_14569

lcl|BLLF01001573.1_cds_GFH20092.1_14569 (HaLaN_17161, GFH20092)


Aliases : HaLaN_17161, GFH20092

Description : Structural maintenance of chromosomes protein


Gene families : OG_01_0001971 (OrthoFinder) Phylogenetic Tree(s): OG0001971_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01001573.1_cds_GFH20092.1_14569
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
Cre12.g493400 30791789, SMC4 Cell cycle.mitosis and meiosis.chromatin... 0.03 OrthoFinder
Cz03g14220.t1 No alias RecF/RecN/SMC, N-terminal; SMCs flexible hinge [Interproscan]. 0.03 OrthoFinder
Cz03g14230.t1 No alias RecF/RecN/SMC, N-terminal [Interproscan]. 0.02 OrthoFinder
EOD10750 No alias RecF/RecN/SMC, N-terminal [Interproscan]. 0.01 OrthoFinder
OT_06G01300.1 No alias RecF/RecN/SMC, N-terminal; SMCs flexible hinge [Interproscan]. 0.03 OrthoFinder
PTI_03G05440.1 No alias RecF/RecN/SMC, N-terminal; SMCs flexible hinge [Interproscan]. 0.01 OrthoFinder
Sro1170_g248720.1 Contig3531.g27301 Structural maintenance of chromosomes protein 4 (Fragment) 0.02 OrthoFinder
Vocar.0031s0036.1 32890031 SMCs flexible hinge; RecF/RecN/SMC, N-terminal [Interproscan]. 0.04 OrthoFinder
XM_002500796.1 MICPUN_56721, 56721 Condensin complex component 0.02 OrthoFinder
XM_003059384.1 MicpuC2_33825, 33825 Condensin complex component 0.02 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57046.1_8805 PRW57046 Structural maintenance of chromosomes 4 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005694 chromosome IEA Interproscan
BP GO:0051276 chromosome organization IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP Enrichment
CC GO:0008303 caspase complex IEP Enrichment
BP GO:0016255 attachment of GPI anchor to protein IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
CC GO:0042765 GPI-anchor transamidase complex IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR010935 SMC_hinge 146 262
No external refs found!