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  5. lcl|BLLF01001573.1_cds_GFH20090.1_14567

lcl|BLLF01001573.1_cds_GFH20090.1_14567 (HaLaN_17159, GFH20090)


Aliases : HaLaN_17159, GFH20090

Description : Structural maintenance of chromosomes protein 4


Gene families : OG_01_0001971 (OrthoFinder) Phylogenetic Tree(s): OG0001971_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01001573.1_cds_GFH20090.1_14567
Cluster HCCA: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000711.41 tig00000711_g3404.t1 Cell cycle.mitosis and meiosis.chromatin... 0.01 OrthoFinder
Cre12.g493400 30791789, SMC4 Cell cycle.mitosis and meiosis.chromatin... 0.03 OrthoFinder
Cz03g14220.t1 No alias RecF/RecN/SMC, N-terminal; SMCs flexible hinge [Interproscan]. 0.03 OrthoFinder
Cz03g14230.t1 No alias RecF/RecN/SMC, N-terminal [Interproscan]. 0.02 OrthoFinder
Dusal.0297s00010.1 33197376 RecF/RecN/SMC, N-terminal [Interproscan]. 0.02 OrthoFinder
EOD07120 No alias RecF/RecN/SMC, N-terminal [Interproscan]. 0.02 OrthoFinder
EOD10750 No alias RecF/RecN/SMC, N-terminal [Interproscan]. 0.01 OrthoFinder
EOD30554 No alias SMCs flexible hinge [Interproscan]. 0.02 OrthoFinder
EOD40964 No alias RecF/RecN/SMC, N-terminal [Interproscan]. 0.02 OrthoFinder
OT_06G01300.1 No alias RecF/RecN/SMC, N-terminal; SMCs flexible hinge [Interproscan]. 0.02 OrthoFinder
PTI_03G05440.1 No alias RecF/RecN/SMC, N-terminal; SMCs flexible hinge [Interproscan]. 0.03 OrthoFinder
Sro1170_g248720.1 Contig3531.g27301 Structural maintenance of chromosomes protein 4 (Fragment) 0.02 OrthoFinder
TP14G01310.1 No alias RecF/RecN/SMC, N-terminal; SMCs flexible hinge [Interproscan]. 0.02 OrthoFinder
Vocar.0031s0036.1 32890031 SMCs flexible hinge; RecF/RecN/SMC, N-terminal [Interproscan]. 0.02 OrthoFinder
XM_002500796.1 MICPUN_56721, 56721 Condensin complex component 0.03 OrthoFinder
XM_003059384.1 MicpuC2_33825, 33825 Condensin complex component 0.02 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57046.1_8805 PRW57046 Structural maintenance of chromosomes 4 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499969.1_8922 KAA8499969 Structural maintenance of chromosomes protein 4 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
CC GO:0008303 caspase complex IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0016255 attachment of GPI anchor to protein IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
CC GO:0042765 GPI-anchor transamidase complex IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment

No InterPro domains available for this sequence

No external refs found!