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  5. Cpa|evm.model.tig00021464.48

Cpa|evm.model.tig00021464.48 (tig00021464_g21752.t1)


Aliases : tig00021464_g21752.t1

No description available


Gene families : OG_01_0002939 (OrthoFinder) Phylogenetic Tree(s): OG0002939_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021464.48
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Cre01.g018000 30788815, RPA12 No description available 0.05 OrthoFinder
Cz06g15070.t1 No alias Zinc finger, TFIIS-type [Interproscan]. 0.02 OrthoFinder
OT_03G04890.1 No alias Zinc finger, TFIIS-type [Interproscan]. 0.02 OrthoFinder
PTI_03G06180.1 No alias Zinc finger, TFIIS-type [Interproscan]. 0.04 OrthoFinder
Sro37_g023050.1 Contig1425.g13121 Polymerase I subunit RPA12 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
BP GO:0006351 transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
InterPro domains Description Start Stop
IPR001222 Znf_TFIIS 87 123
No external refs found!