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  5. lcl|BLLF01001548.1_cds_GFH19961.1_14438

lcl|BLLF01001548.1_cds_GFH19961.1_14438 (HaLaN_17001, GFH19961)


Aliases : HaLaN_17001, GFH19961

Description : LCIB_C_CA domain-containing protein


Gene families : OG_01_0000299 (OrthoFinder) Phylogenetic Tree(s): OG0000299_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01001548.1_cds_GFH19961.1_14438
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
Cre06.g307500 30779446, LCIC No description available 0.03 OrthoFinder
Cre10.g452800 30790505, LCIB No description available 0.02 OrthoFinder
Dusal.0331s00016.1 33192985 Limiting CO2-inducible protein B/C, beta carbonyic... 0.03 OrthoFinder
Sro243_g096950.1 Contig3073.g24519 Inherit from NOG: Low-co2 inducible protein 0.01 OrthoFinder
Sro243_g096960.1 Contig3073.g24520 Inherit from NOG: Low-co2 inducible protein 0.01 OrthoFinder
Sro520_g159080.1 Contig2679.g21664 Low-co2 inducible protein 0.02 OrthoFinder
Sro86_g045730.1 Contig2999.g23851 Inherit from NOG: Low-co2 inducible protein 0.01 OrthoFinder
TP01G02290.1 No alias Limiting CO2-inducible protein B/C, beta carbonyic... 0.02 OrthoFinder
Vocar.0004s0387.1 32889698 Limiting CO2-inducible protein B/C, beta carbonyic... 0.02 OrthoFinder
Vocar.0030s0054.1 32894574 Limiting CO2-inducible protein B/C, beta carbonyic... 0.04 OrthoFinder
lcl|LHPG02000016.1_cds_PRW33563.1_3375 PRW33563 Low-CO2 inducible 0.03 OrthoFinder
lcl|LHPG02000016.1_cds_PRW33647.1_3377 PRW33647 Low-CO2 inducible 0.02 OrthoFinder
lcl|LHPG02000016.1_cds_PRW33706.1_3342 PRW33706 Low-CO2 inducible 0.03 OrthoFinder
lcl|LHPG02000017.1_cds_PRW33318.1_3464 PRW33318 Low-CO2 inducible 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0004618 phosphoglycerate kinase activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
BP GO:0046034 ATP metabolic process IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR011650 Peptidase_M20_dimer 19 103
IPR040703 LCIB/C_CA 289 402
IPR040703 LCIB/C_CA 210 287
IPR002933 Peptidase_M20 104 198
No external refs found!