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Aliases : HaLaN_16893, GFH19868
Description : Photolyase/cryptochrome alpha/beta domain-containing protein
Gene families : OG_01_0000085 (OrthoFinder) Phylogenetic Tree(s): OG0000085_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|BLLF01001533.1_cds_GFH19868.1_14345 | |
| Cluster | HCCA: Cluster_238 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000391.2 | tig00000391_g24833.t1 | DNA damage response.DNA repair... | 0.03 | OrthoFinder | |
| Cpa|evm.model.tig00020965.69 | tig00020965_g16882.t1 | Cryptochrome DASH, chloroplastic/mitochondrial... | 0.04 | OrthoFinder | |
| Cpa|evm.model.tig00020965.70 | tig00020965_g16882.t1 | Cryptochrome DASH, chloroplastic/mitochondrial... | 0.03 | OrthoFinder | |
| Cpa|evm.model.tig00021012.26 | tig00021012_g17007.t1 | Cryptochrome DASH, chloroplastic/mitochondrial... | 0.02 | OrthoFinder | |
| Cpa|evm.model.tig00021579.19 | tig00021579_g22443.t1 | Cryptochrome-1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder | |
| Cre02.g078939 | 30785814 | Cryptochrome DASH, chloroplastic/mitochondrial... | 0.08 | OrthoFinder | |
| Cz09g17160.t1 | No alias | DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... | 0.03 | OrthoFinder | |
| Dusal.0183s00016.1 | 33202617 | Cryptochrome/DNA photolyase, FAD-binding domain [Interproscan]. | 0.01 | OrthoFinder | |
| EOD11134 | No alias | Putative Cry-DASH cryptochrome [Ensembl]. | 0.02 | OrthoFinder | |
| EOD15451 | No alias | Putative Cry-DASH cryptochrome [Ensembl]. | 0.02 | OrthoFinder | |
| EOD19626 | No alias | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.01 | OrthoFinder | |
| Sro2726_g335660.1 | Contig3579.g27670 | Cryptochrome DASH | 0.03 | OrthoFinder | |
| Sro580_g170080.1 | Contig2039.g17523 | Deoxyribodipyrimidine photo-lyase | 0.02 | OrthoFinder | |
| Transcript_contig_56266 | 56266 | DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... | 0.03 | OrthoFinder | |
| Vocar.0002s0198.1 | 32890551 | Cryptochrome/DNA photolyase, FAD-binding domain [Interproscan]. | 0.03 | OrthoFinder | |
| Vocar.0004s0450.1 | 32889785 | DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... | 0.03 | OrthoFinder | |
| XM_002508739.1 | MICPUN_61974, 61974 | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.03 | OrthoFinder | |
| XM_003057723.1 | MicpuC2_16082, 16082 | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.01 | OrthoFinder | |
| XM_003061182.1 | MicpuC2_19486, 19486 | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.01 | OrthoFinder | |
| XM_003062934.1 | MicpuC2_22169, 22169 | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003684 | damaged DNA binding | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0003906 | DNA-(apurinic or apyrimidinic site) endonuclease activity | IEP | Enrichment |
| MF | GO:0004329 | formate-tetrahydrofolate ligase activity | IEP | Enrichment |
| MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | Enrichment |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Enrichment |
| BP | GO:0006082 | organic acid metabolic process | IEP | Enrichment |
| BP | GO:0006090 | pyruvate metabolic process | IEP | Enrichment |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Enrichment |
| BP | GO:0006096 | glycolytic process | IEP | Enrichment |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | Enrichment |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | Enrichment |
| BP | GO:0006284 | base-excision repair | IEP | Enrichment |
| BP | GO:0006289 | nucleotide-excision repair | IEP | Enrichment |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Enrichment |
| BP | GO:0006757 | ATP generation from ADP | IEP | Enrichment |
| BP | GO:0006812 | cation transport | IEP | Enrichment |
| BP | GO:0006813 | potassium ion transport | IEP | Enrichment |
| MF | GO:0008942 | nitrite reductase [NAD(P)H] activity | IEP | Enrichment |
| BP | GO:0009056 | catabolic process | IEP | Enrichment |
| BP | GO:0009117 | nucleotide metabolic process | IEP | Enrichment |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | Enrichment |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | Enrichment |
| CC | GO:0016021 | integral component of membrane | IEP | Enrichment |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Enrichment |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Enrichment |
| MF | GO:0016661 | oxidoreductase activity, acting on other nitrogenous compounds as donors | IEP | Enrichment |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Enrichment |
| MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Enrichment |
| MF | GO:0016829 | lyase activity | IEP | Enrichment |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | Enrichment |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | Enrichment |
| BP | GO:0019637 | organophosphate metabolic process | IEP | Enrichment |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | Enrichment |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Enrichment |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Enrichment |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Enrichment |
| MF | GO:0032977 | membrane insertase activity | IEP | Enrichment |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Enrichment |
| BP | GO:0046031 | ADP metabolic process | IEP | Enrichment |
| BP | GO:0046034 | ATP metabolic process | IEP | Enrichment |
| MF | GO:0046857 | oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor | IEP | Enrichment |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | Enrichment |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Enrichment |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | Enrichment |
| MF | GO:0098809 | nitrite reductase activity | IEP | Enrichment |
| MF | GO:0140104 | molecular carrier activity | IEP | Enrichment |
| MF | GO:0140597 | protein carrier activity | IEP | Enrichment |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | Enrichment |
| BP | GO:1901575 | organic substance catabolic process | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |