Cpa|evm.model.tig00021464.23 (tig00021464_g21729.t1)

Aliases : tig00021464_g21729.t1

Description : Histidine kinase 3 OS=Arabidopsis thaliana

Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00021464.23
Cluster	HCCA: Cluster_146

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000202.6	tig00000254_g22474.t1	Histidine kinase 3 OS=Arabidopsis thaliana	0.03	OrthoFinder
Cpa\|evm.model.tig00000403.48	tig00000403_g305.t1	Ethylene response sensor 1 OS=Arabidopsis thaliana	0.04	OrthoFinder
Cpa\|evm.model.tig00000605.24	tig00000605_g2490.t1	No description available	0.04	OrthoFinder
Cpa\|evm.model.tig00001155.14	tig00001155_g7320.t1	No description available	0.01	OrthoFinder
Cpa\|evm.model.tig00020553.260	tig00020553_g10746.t1	Probable histidine kinase 6 OS=Oryza sativa subsp. japonica	0.03	OrthoFinder
Cpa\|evm.model.tig00021137.20	tig00021137_g18985.t1	Ethylene receptor 1 OS=Arabidopsis thaliana	0.05	OrthoFinder
Sro1101_g241350.1	Contig3867.g29737	Transcriptional regulatory protein WalR	0.01	OrthoFinder
lcl\|BLLF01000561.1_cds_GFH12981.1_7458	HaLaN_08775, GFH12981	Signal transduction histidine kinase,...	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEA	Interproscan
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	None	Extended
MF	GO:0004673	protein histidine kinase activity	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140299	small molecule sensor activity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000030	mannosyltransferase activity	IEP	Enrichment
MF	GO:0000166	nucleotide binding	IEP	Enrichment
MF	GO:0005488	binding	IEP	Enrichment
BP	GO:0006396	RNA processing	IEP	Enrichment
BP	GO:0006399	tRNA metabolic process	IEP	Enrichment
BP	GO:0006493	protein O-linked glycosylation	IEP	Enrichment
BP	GO:0008033	tRNA processing	IEP	Enrichment
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Enrichment
MF	GO:0017150	tRNA dihydrouridine synthase activity	IEP	Enrichment
BP	GO:0034470	ncRNA processing	IEP	Enrichment
BP	GO:0034660	ncRNA metabolic process	IEP	Enrichment
MF	GO:0036094	small molecule binding	IEP	Enrichment
MF	GO:0043167	ion binding	IEP	Enrichment
MF	GO:0043168	anion binding	IEP	Enrichment
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Enrichment
MF	GO:0070403	NAD+ binding	IEP	Enrichment
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Enrichment
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Enrichment
MF	GO:1901265	nucleoside phosphate binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001789	Sig_transdc_resp-reg_receiver	950	1055
IPR001789	Sig_transdc_resp-reg_receiver	1126	1233
IPR003661	HisK_dim/P	524	587
IPR003594	HATPase_C	639	754

External Links

No external refs found!