Cpa|evm.model.tig00021463.11 (tig00021463_g21619.t1)

Aliases : tig00021463_g21619.t1

Description : Cell division control protein 48 homolog A OS=Arabidopsis thaliana

Gene families : OG_01_0000083 (OrthoFinder) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00021463.11
Cluster	HCCA: Cluster_151

Target	Alias	Description	ECC score	Gene Family Method
Cz09g19130.t1	No alias	AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;...	0.02	OrthoFinder
PTI_10G03770.1	No alias	AAA ATPase, AAA+ lid domain; CDC48, N-terminal...	0.02	OrthoFinder
Sro287_g108550.1	Contig252.g3096	Transitional endoplasmic reticulum ATPase	0.01	OrthoFinder
Sro98_g050450.1	Contig3362.g26337	Transitional endoplasmic reticulum ATPase	0.02	OrthoFinder
lcl\|BLLF01009482.1_cds_GFH33736.1_28213	HaLaN_33147, GFH33736	ATPase, AAA-type, core [Interproscan].	0.01	OrthoFinder
lcl\|VRMN01000001.1_cds_KAA8499724.1_8677	KAA8499724	Cell division cycle protein 48-like	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Enrichment
MF	GO:0003857	3-hydroxyacyl-CoA dehydrogenase activity	IEP	Enrichment
MF	GO:0004175	endopeptidase activity	IEP	Enrichment
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Enrichment
MF	GO:0004298	threonine-type endopeptidase activity	IEP	Enrichment
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Enrichment
CC	GO:0005839	proteasome core complex	IEP	Enrichment
BP	GO:0006631	fatty acid metabolic process	IEP	Enrichment
MF	GO:0008233	peptidase activity	IEP	Enrichment
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Enrichment
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Enrichment
MF	GO:0016787	hydrolase activity	IEP	Enrichment
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Enrichment
BP	GO:0044255	cellular lipid metabolic process	IEP	Enrichment
MF	GO:0070001	aspartic-type peptidase activity	IEP	Enrichment
MF	GO:0070003	threonine-type peptidase activity	IEP	Enrichment
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	491	544
IPR003959	ATPase_AAA_core	248	361
IPR041569	AAA_lid_3	384	424
IPR003338	CDC4_N-term_subdom	33	114
IPR004201	Cdc48_dom2	135	198

External Links

No external refs found!