1. Home
  2. Species
  3. Haematococcus lacustris
  4. Sequence
  5. lcl|BLLF01001421.1_cds_GFH19192.1_13669

lcl|BLLF01001421.1_cds_GFH19192.1_13669 (HaLaN_16100, GFH19192)


Aliases : HaLaN_16100, GFH19192

Description : RPA_C domain-containing protein


Gene families : OG_01_0003292 (OrthoFinder) Phylogenetic Tree(s): OG0003292_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01001421.1_cds_GFH19192.1_13669
Cluster HCCA: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020684.26 tig00020684_g12875.t1 Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.05 OrthoFinder
Cre02.g100000 30785704 Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.07 OrthoFinder
OT_13G01140.1 No alias Replication protein A, C-terminal; OB-fold nucleic acid... 0.02 OrthoFinder
PTI_02G05430.1 No alias Replication protein A, C-terminal [Interproscan]. 0.04 OrthoFinder
Sro461_g147680.1 Contig3552.g27422 Replication protein A 32 kDa subunit 0.04 OrthoFinder
TP05G04330.1 No alias OB-fold nucleic acid binding domain, AA-tRNA... 0.02 OrthoFinder
XM_003058768.1 MicpuC2_57959, 57959 OB-fold nucleic acid binding domain, AA-tRNA... 0.03 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56187.1_10019 PRW56187 Replication A 32 kDa subunit A-like 0.03 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492979.1_2715 KAA8492979 Replication protein A 32 kDa subunit 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003883 CTP synthase activity IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Enrichment
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0052855 ADP-dependent NAD(P)H-hydrate dehydratase activity IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR014892 RPA_C 364 464
IPR004365 NA-bd_OB_tRNA 130 204
No external refs found!