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  5. lcl|BLLF01001390.1_cds_GFH19003.1_13480

lcl|BLLF01001390.1_cds_GFH19003.1_13480 (HaLaN_15888, GFH19003)


Aliases : HaLaN_15888, GFH19003

Description : Ribosomal protein L4/L1e [Interproscan].


Gene families : OG_01_0001152 (OrthoFinder) Phylogenetic Tree(s): OG0001152_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01001390.1_cds_GFH19003.1_13480
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
Cre11.g479500 30775927, PRPL4 Protein biosynthesis.organelle translation... 0.05 OrthoFinder
Cz03g02040.t1 No alias Ribosomal protein L4/L1e [Interproscan]. 0.06 OrthoFinder
Dusal.0246s00007.1 33197700 Ribosomal protein L4/L1e [Interproscan]. 0.02 OrthoFinder
EOD32718 No alias Ribosomal protein L4/L1e [Interproscan]. 0.03 OrthoFinder
OT_16G00330.1 No alias Ribosomal protein L4/L1e [Interproscan]. 0.04 OrthoFinder
Sro279_g106690.1 Contig3140.g24908 Protein L4 0.03 OrthoFinder
Sro51_chlor_g029480.1 Rpl4 Rpl4 0.02 OrthoFinder
TPCG02350.1 No alias Ribosomal protein L4/L1e [Interproscan]. 0.03 OrthoFinder
Transcript_contig_54114 54114 Ribosomal protein L4/L1e [Interproscan]. 0.02 OrthoFinder
Vocar.0048s0048.1 32893676 Ribosomal protein L4/L1e [Interproscan]. 0.02 OrthoFinder
XM_002503039.1 MICPUN_59033, 59033 Ribosomal protein L4/L1e [Interproscan]. 0.05 OrthoFinder
XM_003061053.1 MicpuC2_48008, 48008 Ribosomal protein L4/L1e [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45732.1_1468 PRW45732 50S ribosomal L4 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002136 Ribosomal_L4/L1e 63 259
No external refs found!