lcl|BLLF01001276.1_cds_GFH18281.1_12758 (HaLaN_15055, GFH18281)

Aliases : HaLaN_15055, GFH18281

Description : TRNA-splicing endonuclease positive effector

Gene families : OG_01_0005132 (OrthoFinder) Phylogenetic Tree(s): OG0005132_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|BLLF01001276.1_cds_GFH18281.1_12758
Cluster	HCCA: Cluster_1

Target	Alias	Description	ECC score	Gene Family Method
lcl\|BLLF01000058.1_cds_GFH06831.1_1308	HaLaN_01535, GFH06831	Regulator of nonsense transcripts 1	0.03	OrthoFinder
lcl\|BLLF01002165.1_cds_GFH22975.1_17452	HaLaN_20519, GFH22975	Putative helicase MAGATAMA 3	0.03	OrthoFinder
lcl\|BLLF01002165.1_cds_GFH22976.1_17453	HaLaN_20520, GFH22976	Regulator of nonsense transcripts 1	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	Enrichment
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Enrichment
BP	GO:0006298	mismatch repair	IEP	Enrichment
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	Enrichment
BP	GO:0016311	dephosphorylation	IEP	Enrichment
BP	GO:0016567	protein ubiquitination	IEP	Enrichment
MF	GO:0016791	phosphatase activity	IEP	Enrichment
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Enrichment
MF	GO:0030246	carbohydrate binding	IEP	Enrichment
MF	GO:0030247	polysaccharide binding	IEP	Enrichment
MF	GO:0030983	mismatched DNA binding	IEP	Enrichment
BP	GO:0032446	protein modification by small protein conjugation	IEP	Enrichment
MF	GO:0050661	NADP binding	IEP	Enrichment
MF	GO:2001070	starch binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR041679	DNA2/NAM7-like_C	855	1060
IPR041677	DNA2/NAM7_AAA_11	391	840

External Links

No external refs found!