- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : HaLaN_15050, GFH18276
Description : Protein HGH1 N-terminal [Interproscan].
Gene families : OG_01_0003447 (OrthoFinder) Phylogenetic Tree(s): OG0003447_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|BLLF01001276.1_cds_GFH18276.1_12753 | |
| Cluster | HCCA: Cluster_211 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| OT_08G02430.1 | No alias | Protein HGH1 N-terminal [Interproscan]. | 0.03 | OrthoFinder | |
| Sro2061_g312940.1 | Contig1296.g12032 | Protein HGH1 homolog | 0.01 | OrthoFinder | |
| Sro2483_g328920.1 | Contig3811.g29192 | Protein HGH1 homolog | 0.03 | OrthoFinder | |
| TP19G00580.1 | No alias | Protein HGH1 C-terminal; Transcription factor IIS,... | 0.02 | OrthoFinder | |
| Transcript_contig_1059 | 1059 | Hypothetical protein | 0.02 | OrthoFinder | |
| Vocar.0001s1332.1 | 32884972 | Protein HGH1 N-terminal [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|LHPG02000001.1_cds_PRW61586.1_644 | PRW61586 | HGH1-like protein | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Enrichment |
| MF | GO:0004611 | phosphoenolpyruvate carboxykinase activity | IEP | Enrichment |
| MF | GO:0004616 | phosphogluconate dehydrogenase (decarboxylating) activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| BP | GO:0006098 | pentose-phosphate shunt | IEP | Enrichment |
| BP | GO:0006099 | tricarboxylic acid cycle | IEP | Enrichment |
| BP | GO:0006364 | rRNA processing | IEP | Enrichment |
| BP | GO:0006739 | NADP metabolic process | IEP | Enrichment |
| BP | GO:0006740 | NADPH regeneration | IEP | Enrichment |
| MF | GO:0008237 | metallopeptidase activity | IEP | Enrichment |
| MF | GO:0008964 | phosphoenolpyruvate carboxylase activity | IEP | Enrichment |
| BP | GO:0015977 | carbon fixation | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
| MF | GO:0016831 | carboxy-lyase activity | IEP | Enrichment |
| MF | GO:0016887 | ATPase | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| BP | GO:0030001 | metal ion transport | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| CC | GO:0030684 | preribosome | IEP | Enrichment |
| CC | GO:0032040 | small-subunit processome | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0051156 | glucose 6-phosphate metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007205 | Protein_HGH1_N | 108 | 249 |
| No external refs found! |