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Aliases : HaLaN_14938, GFH18182
Description : DNA replication factor C complex subunit 2
Gene families : OG_01_0003051 (OrthoFinder) Phylogenetic Tree(s): OG0003051_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|BLLF01001259.1_cds_GFH18182.1_12659 | |
| Cluster | HCCA: Cluster_211 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000042.30 | tig00000042_g15422.t1 | Cell cycle.interphase.DNA... | 0.02 | OrthoFinder | |
| Cre07.g337150 | 30774314, RFC2 | Cell cycle.interphase.DNA... | 0.02 | OrthoFinder | |
| EOD04655 | No alias | Replication factor C, C-terminal; ATPase, AAA-type, core... | 0.02 | OrthoFinder | |
| EOD09339 | No alias | Putative replication factor C subunit 2 [Ensembl]. | 0.03 | OrthoFinder | |
| PTI_22G00310.1 | No alias | Replication factor C, C-terminal; ATPase, AAA-type, core... | 0.01 | OrthoFinder | |
| Sro730_g194110.1 | Contig80.g843 | Factor C subunit 2 | 0.01 | OrthoFinder | |
| TP11G02080.1 | No alias | ATPase, AAA-type, core; Replication factor C, C-terminal... | 0.02 | OrthoFinder | |
| Vocar.0023s0214.1 | 32883403 | ATPase, AAA-type, core; Replication factor C, C-terminal... | 0.02 | OrthoFinder | |
| XM_002507437.1 | MICPUN_54938, 54938 | Replication factor c, subunit 2 (RFC2) | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003677 | DNA binding | IEP | Enrichment |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Enrichment |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006275 | regulation of DNA replication | IEP | Enrichment |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Enrichment |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| BP | GO:0016311 | dephosphorylation | IEP | Enrichment |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Enrichment |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Enrichment |
| MF | GO:0016791 | phosphatase activity | IEP | Enrichment |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Enrichment |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Enrichment |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Enrichment |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Enrichment |
| MF | GO:0097747 | RNA polymerase activity | IEP | Enrichment |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013748 | Rep_factorC_C | 101 | 186 |
| No external refs found! |