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Aliases : HaLaN_14768, GFH18033
Description : Chloroplast carotene biosynthesis related protein
Gene families : OG_01_0000479 (OrthoFinder) Phylogenetic Tree(s): OG0000479_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|BLLF01001239.1_cds_GFH18033.1_12510 | |
| Cluster | HCCA: Cluster_24 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre07.g320400 | 30774456 | Photosynthesis.photophosphorylation.photosystem... | 0.04 | OrthoFinder | |
| Cre07.g320450 | 30775051 | Photosynthesis.photophosphorylation.photosystem... | 0.04 | OrthoFinder | |
| Cre08.g384650 | 30773689 | Photosynthesis.photophosphorylation.photosystem... | 0.08 | OrthoFinder | |
| Cre09.g394325 | 30780217, ELI3 | Photosynthesis.photophosphorylation.photosystem... | 0.06 | OrthoFinder | |
| Cre16.g679250 | 30778123, ELI1 | Photosynthesis.photophosphorylation.photosystem... | 0.05 | OrthoFinder | |
| Cz07g29280.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.04 | OrthoFinder | |
| Cz07g30110.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.05 | OrthoFinder | |
| Cz08g00120.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.07 | OrthoFinder | |
| Cz14g24190.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.06 | OrthoFinder | |
| Cz17g16050.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.06 | OrthoFinder | |
| Dusal.0172s00023.1 | 33188490 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Dusal.1125s00002.1 | 33199649 | Chlorophyll A-B binding protein [Interproscan]. | 0.01 | OrthoFinder | |
| OT_04G01820.1 | No alias | FAS1 domain; Chlorophyll A-B binding protein [Interproscan]. | 0.01 | OrthoFinder | |
| OT_13G02960.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Transcript_contig_55820 | 55820 | Hypothetical protein | 0.05 | OrthoFinder | |
| Transcript_contig_78826 | 78826 | Chlorophyll A-B binding protein [Interproscan]. | 0.05 | OrthoFinder | |
| Vocar.0001s0155.1 | 32884709 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Vocar.0006s0022.1 | 32894246 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| XM_002506082.1 | MICPUN_63993, 63993 | Early light induced protein-like protein, chloroplast... | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0003333 | amino acid transmembrane transport | IEP | Enrichment |
| MF | GO:0004421 | hydroxymethylglutaryl-CoA synthase activity | IEP | Enrichment |
| MF | GO:0004601 | peroxidase activity | IEP | Enrichment |
| MF | GO:0004602 | glutathione peroxidase activity | IEP | Enrichment |
| MF | GO:0004784 | superoxide dismutase activity | IEP | Enrichment |
| MF | GO:0004852 | uroporphyrinogen-III synthase activity | IEP | Enrichment |
| BP | GO:0006534 | cysteine metabolic process | IEP | Enrichment |
| BP | GO:0006535 | cysteine biosynthetic process from serine | IEP | Enrichment |
| BP | GO:0006563 | L-serine metabolic process | IEP | Enrichment |
| BP | GO:0006801 | superoxide metabolic process | IEP | Enrichment |
| BP | GO:0006865 | amino acid transport | IEP | Enrichment |
| BP | GO:0006979 | response to oxidative stress | IEP | Enrichment |
| MF | GO:0008374 | O-acyltransferase activity | IEP | Enrichment |
| MF | GO:0009001 | serine O-acetyltransferase activity | IEP | Enrichment |
| BP | GO:0009069 | serine family amino acid metabolic process | IEP | Enrichment |
| BP | GO:0009070 | serine family amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0015849 | organic acid transport | IEP | Enrichment |
| MF | GO:0016209 | antioxidant activity | IEP | Enrichment |
| MF | GO:0016412 | serine O-acyltransferase activity | IEP | Enrichment |
| MF | GO:0016413 | O-acetyltransferase activity | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Enrichment |
| MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | Enrichment |
| MF | GO:0016730 | oxidoreductase activity, acting on iron-sulfur proteins as donors | IEP | Enrichment |
| MF | GO:0016746 | acyltransferase activity | IEP | Enrichment |
| BP | GO:0019344 | cysteine biosynthetic process | IEP | Enrichment |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Enrichment |
| MF | GO:0046912 | acyltransferase, acyl groups converted into alkyl on transfer | IEP | Enrichment |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Enrichment |
| BP | GO:1903825 | organic acid transmembrane transport | IEP | Enrichment |
| BP | GO:1905039 | carboxylic acid transmembrane transport | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022796 | Chloroa_b-bind | 35 | 73 |
| No external refs found! |