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  5. lcl|BLLF01001221.1_cds_GFH17915.1_12392

lcl|BLLF01001221.1_cds_GFH17915.1_12392 (HaLaN_14639, GFH17915)


Aliases : HaLaN_14639, GFH17915

Description : Starch synthase, chloroplastic/amyloplastic


Gene families : OG_01_0000262 (OrthoFinder) Phylogenetic Tree(s): OG0000262_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: lcl|BLLF01001221.1_cds_GFH17915.1_12392
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Dusal.0211s00012.1 33198598 Starch synthase, catalytic domain [Interproscan]. 0.02 OrthoFinder
OT_13G01180.1 No alias Starch synthase, catalytic domain; Glycosyl transferase,... 0.02 OrthoFinder
Vocar.0015s0224.1 32898942 Glycosyl transferase, family 1; Starch synthase,... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016744 transketolase or transaldolase activity IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 20 99
No external refs found!