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  5. lcl|BLLF01001137.1_cds_GFH17369.1_11846

lcl|BLLF01001137.1_cds_GFH17369.1_11846 (HaLaN_13994, GFH17369)


Aliases : HaLaN_13994, GFH17369

Description : PUB domain-containing protein


Gene families : OG_01_0000995 (OrthoFinder) Phylogenetic Tree(s): OG0000995_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01001137.1_cds_GFH17369.1_11846
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
Cre02.g116650 30785743 No description available 0.02 OrthoFinder
TP01G00740.1 No alias IQ motif, EF-hand binding site [Interproscan]. 0.01 OrthoFinder
Transcript_contig_56632 56632 PUB domain [Interproscan]. 0.03 OrthoFinder
XM_003062661.1 MicpuC2_68787, 68787 PUB domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
BP GO:0018142 protein-DNA covalent cross-linking IEP Enrichment
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
InterPro domains Description Start Stop
IPR018997 PUB_domain 28 102
No external refs found!