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  5. Cpa|evm.model.tig00021434.44

Cpa|evm.model.tig00021434.44 (tig00021434_g21348.t1)


Aliases : tig00021434_g21348.t1

No description available


Gene families : OG_01_0001975 (OrthoFinder) Phylogenetic Tree(s): OG0001975_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021434.44
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_56240 56240 LIS1 homology motif; WD40 repeat [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
InterPro domains Description Start Stop
IPR011659 PD40 151 165
IPR001680 WD40_repeat 95 124
IPR001810 F-box_dom 6 40
No external refs found!