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  5. lcl|BLLF01001104.1_cds_GFH17146.1_11623

lcl|BLLF01001104.1_cds_GFH17146.1_11623 (HaLaN_13711, GFH17146)


Aliases : HaLaN_13711, GFH17146

Description : Carotenoid oxygenase


Gene families : OG_01_0000773 (OrthoFinder) Phylogenetic Tree(s): OG0000773_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01001104.1_cds_GFH17146.1_11623
Cluster HCCA: Cluster_289

Target Alias Description ECC score Gene Family Method Actions
Cre16.g657800 30777499, CCD3 Carotenoid 9,10(9,10)-cleavage dioxygenase 1 OS=Pisum sativum 0.02 OrthoFinder
Cz09g31270.t1 No alias Carotenoid oxygenase [Interproscan]. 0.01 OrthoFinder
OT_03G05690.1 No alias Carotenoid oxygenase [Interproscan]. 0.03 OrthoFinder
Vocar.0004s0072.1 32889789 Carotenoid oxygenase [Interproscan]. 0.02 OrthoFinder
XM_003055246.1 MicpuC2_13068, 13068 Carotenoid oxygenase [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59430.1_6911 PRW59430 Apocarotenoid-15,15-oxygenase 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 5 471
No external refs found!