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  5. lcl|BLLF01001053.1_cds_GFH16801.1_11278

lcl|BLLF01001053.1_cds_GFH16801.1_11278 (HaLaN_13298, GFH16801)


Aliases : HaLaN_13298, GFH16801

Description : Helicase, C-terminal; DEAD/DEAH box helicase domain [Interproscan].


Gene families : OG_01_0003345 (OrthoFinder) Phylogenetic Tree(s): OG0003345_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01001053.1_cds_GFH16801.1_11278
Cluster HCCA: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
Cre05.g238900 30783389 RNA biosynthesis.rRNA biogenesis.RH57 RNA helicase 0.01 OrthoFinder
Dusal.0269s00014.1 33186351 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.01 OrthoFinder
EOD38134 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.01 OrthoFinder
PTI_02G03460.1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.02 OrthoFinder
Vocar.0003s0482.1 32888943 DEAD/DEAH box helicase domain; Helicase, C-terminal... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
CC GO:0005743 mitochondrial inner membrane IEP Enrichment
CC GO:0005777 peroxisome IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
CC GO:0019866 organelle inner membrane IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
CC GO:0042579 microbody IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
CC GO:0061617 MICOS complex IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:0098800 inner mitochondrial membrane protein complex IEP Enrichment
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 144 313
IPR001650 Helicase_C 349 457
No external refs found!