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  5. Cpa|evm.model.tig00000169.10

Cpa|evm.model.tig00000169.10 (tig00000169_g11882.t1)


Aliases : tig00000169_g11882.t1

Description : Protein biosynthesis.aminoacyl-tRNA synthetase activities.threonine-tRNA ligase


Gene families : OG_01_0001392 (OrthoFinder) Phylogenetic Tree(s): OG0001392_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000169.10
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Cre10.g421600 30790345 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 OrthoFinder
Cz05g37100.t1 No alias Threonyl/alanyl tRNA synthetase, SAD [Interproscan]. 0.02 OrthoFinder
OT_07G00280.1 No alias Anticodon-binding; Threonyl/alanyl tRNA synthetase, SAD;... 0.02 OrthoFinder
Sro185_g080510.1 Contig1228.g11526 Threonine--tRNA ligase catalytic 0.05 OrthoFinder
Transcript_contig_89963 89963 Threonyl/alanyl tRNA synthetase, SAD [Interproscan]. 0.02 OrthoFinder
Vocar.0075s0006.1 32895798 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T);... 0.03 OrthoFinder
XM_002499478.1 MICPUN_78424, 78424 Anticodon-binding; Aminoacyl-tRNA synthetase, class II... 0.04 OrthoFinder
XM_003058253.1 MicpuC2_49582, 49582 Anticodon-binding; Aminoacyl-tRNA synthetase, class II... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0004817 cysteine-tRNA ligase activity IEP Enrichment
MF GO:0004820 glycine-tRNA ligase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006426 glycyl-tRNA aminoacylation IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016972 thiol oxidase activity IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0042803 protein homodimerization activity IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR002314 aa-tRNA-synt_IIb 368 573
IPR004154 Anticodon-bd 585 682
IPR012947 tRNA_SAD 204 256
No external refs found!