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  5. lcl|BLLF01000981.1_cds_GFH16334.1_10811

lcl|BLLF01000981.1_cds_GFH16334.1_10811 (HaLaN_12731, GFH16334)


Aliases : HaLaN_12731, GFH16334

Description : Bestrophin/UPF0187 [Interproscan].


Gene families : OG_01_0000064 (OrthoFinder) Phylogenetic Tree(s): OG0000064_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000981.1_cds_GFH16334.1_10811
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Cre16.g663400 30777714 Solute transport.channels.VCCN chloride anion channel 0.02 OrthoFinder
Transcript_contig_79780 79780 Hypothetical protein 0.04 OrthoFinder
Vocar.0027s0112.1 32887109 Bestrophin/UPF0187 [Interproscan]. 0.02 OrthoFinder
Vocar.0041s0049.1 32888730 Bestrophin/UPF0187 [Interproscan]. 0.02 OrthoFinder
XM_002507047.1 MICPUN_54949, 54949 Bestrophin/UPF0187 [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000016.1_cds_PRW33726.1_3376 PRW33726 UPF0187 chloroplastic 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR021134 Bestrophin/UPF0187 9 99
No external refs found!