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  5. lcl|BLLF01000932.1_cds_GFH16006.1_10483

lcl|BLLF01000932.1_cds_GFH16006.1_10483 (HaLaN_12349, GFH16006)


Aliases : HaLaN_12349, GFH16006

Description : CBF domain-containing protein


Gene families : OG_01_0002091 (OrthoFinder) Phylogenetic Tree(s): OG0002091_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000932.1_cds_GFH16006.1_10483
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021293.22 tig00021293_g20014.t1 No description available 0.07 OrthoFinder
Cpa|evm.model.tig00021293.23 tig00021293_g20014.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder
Cre10.g459600 30790609 Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder
Cz08g12220.t1 No alias Hypothetical protein 0.04 OrthoFinder
Cz08g12230.t1 No alias Hypothetical protein 0.04 OrthoFinder
Cz08g12240.t1 No alias CCAAT-binding factor [Interproscan]. 0.05 OrthoFinder
Dusal.0293s00003.1 33190184 CCAAT-binding factor [Interproscan]. 0.03 OrthoFinder
EOD11177 No alias CCAAT-binding factor [Interproscan]. 0.05 OrthoFinder
OT_14G00120.1 No alias CCAAT-binding factor [Interproscan]. 0.04 OrthoFinder
PTI_33G00080.1 No alias CCAAT-binding factor [Interproscan]. 0.06 OrthoFinder
Sro381_g130900.1 Contig161.g1823 CCAAT/enhancer-binding protein zeta 0.06 OrthoFinder
TP01G09110.1 No alias CCAAT-binding factor [Interproscan]. 0.04 OrthoFinder
Transcript_contig_78321 78321 CCAAT-binding factor [Interproscan]. 0.02 OrthoFinder
Vocar.0020s0188.1 32886771 CCAAT-binding factor [Interproscan]. 0.04 OrthoFinder
XM_003063700.1 MicpuC2_49035, 49035 CCAAT-binding factor [Interproscan]. 0.07 OrthoFinder
lcl|LHPG02000019.1_cds_PRW32482.1_3998 PRW32482 CCAAT enhancer-binding zeta 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0030688 preribosome, small subunit precursor IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR005612 CCAAT-binding_factor 74 124
IPR005612 CCAAT-binding_factor 165 195
No external refs found!