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  5. lcl|BLLF01000889.1_cds_GFH15717.1_10194

lcl|BLLF01000889.1_cds_GFH15717.1_10194 (HaLaN_11997, GFH15717)


Aliases : HaLaN_11997, GFH15717

Description : ATP-dependent Clp protease proteolytic subunit


Gene families : OG_01_0000040 (OrthoFinder) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000889.1_cds_GFH15717.1_10194
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
Cre12.g500950 30792003, CLPP4 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder
Cre14.g619100 30776241, CLPR1 Protein degradation.peptidase families.serine-type... 0.04 OrthoFinder
Cz03g18040.t1 No alias Clp protease proteolytic subunit... 0.03 OrthoFinder
Cz12g19140.t1 No alias Clp protease proteolytic subunit... 0.02 OrthoFinder
Dusal.0235s00001.1 33189619 Clp protease proteolytic subunit... 0.01 OrthoFinder
EOD14390 No alias Putative endopeptidase Clp [Ensembl]. 0.01 OrthoFinder
EOD40305 No alias Putative endopeptidase Clp [Ensembl]. 0.02 OrthoFinder
PTI_03G06500.1 No alias Clp protease proteolytic subunit... 0.03 OrthoFinder
TP14G01640.1 No alias Clp protease proteolytic subunit... 0.01 OrthoFinder
Transcript_contig_78941 78941 Clp protease proteolytic subunit... 0.01 OrthoFinder
Vocar.0006s0234.1 32894393 Clp protease proteolytic subunit... 0.02 OrthoFinder
XM_002502598.1 MICPUN_108326, 108326 Clp protease proteolytic subunit... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 23 114
No external refs found!