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  5. lcl|BLLF01000849.1_cds_GFH15429.1_9906

lcl|BLLF01000849.1_cds_GFH15429.1_9906 (HaLaN_11656, GFH15429)


Aliases : HaLaN_11656, GFH15429

Description : La-type HTH domain [Interproscan].


Gene families : OG_01_0000377 (OrthoFinder) Phylogenetic Tree(s): OG0000377_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000849.1_cds_GFH15429.1_9906
Cluster HCCA: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
Cre02.g106250 30785930, LAL2 La-related protein 6A OS=Arabidopsis thaliana 0.01 OrthoFinder
Cz13g03150.t1 No alias La protein, RNA-binding domain; RNA recognition motif... 0.01 OrthoFinder
OT_01G04880.1 No alias RNA recognition motif domain; La-type HTH domain [Interproscan]. 0.01 OrthoFinder
TP07G05180.1 No alias Hypothetical protein 0.01 OrthoFinder
Vocar.0001s1568.1 32885881 RNA recognition motif domain [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45723.1_1269 PRW45723 La 1 0.03 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494867.1_3397 KAA8494867 Lupus La protein 0.01 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493506.1_4268 KAA8493506 La-related protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
InterPro domains Description Start Stop
IPR006630 La_HTH 14 39
No external refs found!