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Aliases : HaLaN_10989, GFH14862
Description : Ribosomal protein L30, ferredoxin-like fold domain; Ribosomal protein L30, N-terminal [Interproscan].
Gene families : OG_01_0002109 (OrthoFinder) Phylogenetic Tree(s): OG0002109_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|BLLF01000775.1_cds_GFH14862.1_9339 | |
| Cluster | HCCA: Cluster_201 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00020909.42 | tig00020909_g15363.t1 | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.11 | OrthoFinder | |
| Cre12.g537800 | 30791776, RPL7 | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.05 | OrthoFinder | |
| Cz10g26010.t1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| Dusal.1371s00001.1 | 33191881 | Ribosomal protein L30, ferredoxin-like fold domain;... | 0.04 | OrthoFinder | |
| EOD11472 | No alias | Ribosomal protein L30, N-terminal; Ribosomal protein... | 0.07 | OrthoFinder | |
| EOD41169 | No alias | Ribosomal protein L30, N-terminal; Ribosomal protein... | 0.07 | OrthoFinder | |
| OT_03G01610.1 | No alias | Ribosomal protein L30, N-terminal; Ribosomal protein... | 0.04 | OrthoFinder | |
| PTI_19G01830.1 | No alias | Ribosomal protein L30, ferredoxin-like fold domain;... | 0.09 | OrthoFinder | |
| Sro264_g102550.1 | Contig921.g9681 | 60S ribosomal protein L7 | 0.09 | OrthoFinder | |
| SymbC1.scaffold4779.1 | 4779.1 | Ribosomal protein L30, ferredoxin-like fold domain;... | 0.02 | OrthoFinder | |
| SymbC1.scaffold680.2 | 680.2 | Ribosomal protein L30, ferredoxin-like fold domain;... | 0.04 | OrthoFinder | |
| TP02G06700.1 | No alias | Ribosomal protein L30, ferredoxin-like fold domain;... | 0.05 | OrthoFinder | |
| Vocar.0034s0005.1 | 32893109 | Ribosomal protein L30, N-terminal; Ribosomal protein... | 0.07 | OrthoFinder | |
| XM_002500889.1 | MICPUN_106801, 106801 | Ribosomal protein L30, ferredoxin-like fold domain;... | 0.06 | OrthoFinder | |
| XM_003056432.1 | MicpuC2_31664, 31664 | Ribosomal protein L30, ferredoxin-like fold domain;... | 0.03 | OrthoFinder | |
| lcl|LHPG02000024.1_cds_PRW20371.1_5557 | PRW20371 | 60S ribosomal L7-2 | 0.06 | OrthoFinder | |
| lcl|VRMN01000001.1_cds_KAA8499623.1_8576 | KAA8499623 | 60S ribosomal protein L7-4 | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Enrichment |
| MF | GO:0004455 | ketol-acid reductoisomerase activity | IEP | Enrichment |
| MF | GO:0005198 | structural molecule activity | IEP | Enrichment |
| MF | GO:0005261 | cation channel activity | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005840 | ribosome | IEP | Enrichment |
| BP | GO:0006082 | organic acid metabolic process | IEP | Enrichment |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0006412 | translation | IEP | Enrichment |
| BP | GO:0006479 | protein methylation | IEP | Enrichment |
| BP | GO:0006518 | peptide metabolic process | IEP | Enrichment |
| BP | GO:0006754 | ATP biosynthetic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Enrichment |
| BP | GO:0008213 | protein alkylation | IEP | Enrichment |
| MF | GO:0008276 | protein methyltransferase activity | IEP | Enrichment |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Enrichment |
| BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0009081 | branched-chain amino acid metabolic process | IEP | Enrichment |
| BP | GO:0009082 | branched-chain amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015252 | proton channel activity | IEP | Enrichment |
| BP | GO:0015985 | energy coupled proton transport, down electrochemical gradient | IEP | Enrichment |
| BP | GO:0015986 | ATP synthesis coupled proton transport | IEP | Enrichment |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | Enrichment |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | Enrichment |
| BP | GO:0016569 | covalent chromatin modification | IEP | Enrichment |
| BP | GO:0016570 | histone modification | IEP | Enrichment |
| BP | GO:0016571 | histone methylation | IEP | Enrichment |
| MF | GO:0016874 | ligase activity | IEP | Enrichment |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | Enrichment |
| MF | GO:0018024 | histone-lysine N-methyltransferase activity | IEP | Enrichment |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | Enrichment |
| BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
| BP | GO:0032259 | methylation | IEP | Enrichment |
| BP | GO:0034220 | ion transmembrane transport | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0034968 | histone lysine methylation | IEP | Enrichment |
| MF | GO:0042054 | histone methyltransferase activity | IEP | Enrichment |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0043414 | macromolecule methylation | IEP | Enrichment |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Enrichment |
| BP | GO:0043604 | amide biosynthetic process | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:0044281 | small molecule metabolic process | IEP | Enrichment |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | Enrichment |
| MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | Enrichment |
| MF | GO:0046983 | protein dimerization activity | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0098655 | cation transmembrane transport | IEP | Enrichment |
| BP | GO:0098660 | inorganic ion transmembrane transport | IEP | Enrichment |
| BP | GO:0098662 | inorganic cation transmembrane transport | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | Enrichment |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
| BP | GO:1902600 | proton transmembrane transport | IEP | Enrichment |
| No external refs found! |