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  5. lcl|BLLF01000775.1_cds_GFH14858.1_9335

lcl|BLLF01000775.1_cds_GFH14858.1_9335 (HaLaN_10985, GFH14858)


Aliases : HaLaN_10985, GFH14858

Description : H2TH domain-containing protein


Gene families : OG_01_0003087 (OrthoFinder) Phylogenetic Tree(s): OG0003087_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000775.1_cds_GFH14858.1_9335
Cluster HCCA: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
Cz01g14100.t1 No alias DNA glycosylase/AP lyase, H2TH DNA-binding;... 0.02 OrthoFinder
EOD23911 No alias Putative formamidopyrimidine-DNA glycosylase [Ensembl]. 0.02 OrthoFinder
OT_12G00670.1 No alias DNA glycosylase/AP lyase, H2TH DNA-binding;... 0.05 OrthoFinder
Transcript_contig_55862 55862 DNA glycosylase/AP lyase, H2TH DNA-binding;... 0.05 OrthoFinder
Vocar.0005s0225.1 32883971 Formamidopyrimidine-DNA glycosylase, catalytic domain;... 0.02 OrthoFinder
XM_002503591.1 MICPUN_60143, 60143 DNA glycosylase/AP lyase, H2TH DNA-binding;... 0.02 OrthoFinder
lcl|LHPG02000025.1_cds_PRW20199.1_5716 PRW20199 Formamidopyrimidine-DNA glycosylase isoform X2 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEA Interproscan
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEA Interproscan
BP GO:0006284 base-excision repair IEA Interproscan
BP GO:0006289 nucleotide-excision repair IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
InterPro domains Description Start Stop
IPR015886 DNA_glyclase/AP_lyase_DNA-bd 66 120
IPR012319 FPG_cat 25 57
No external refs found!