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Aliases : HaLaN_10940, GFH14819
Description : ATP-dependent Clp protease proteolytic subunit
Gene families : OG_01_0000040 (OrthoFinder) Phylogenetic Tree(s): OG0000040_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|BLLF01000770.1_cds_GFH14819.1_9296 | |
| Cluster | HCCA: Cluster_49 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre16.g682900 | 30778138, CLPR2 | Protein degradation.peptidase families.serine-type... | 0.02 | OrthoFinder | |
| Cz02g22090.t1 | No alias | Clp protease proteolytic subunit... | 0.03 | OrthoFinder | |
| Cz08g10130.t1 | No alias | Clp protease proteolytic subunit... | 0.02 | OrthoFinder | |
| Cz19g05120.t1 | No alias | Clp protease proteolytic subunit... | 0.01 | OrthoFinder | |
| EOD08646 | No alias | Putative endopeptidase Clp [Ensembl]. | 0.02 | OrthoFinder | |
| EOD15305 | No alias | Putative endopeptidase Clp [Ensembl]. | 0.01 | OrthoFinder | |
| EOD21968 | No alias | Clp protease proteolytic subunit... | 0.01 | OrthoFinder | |
| EOD29710 | No alias | Putative endopeptidase Clp [Ensembl]. | 0.03 | OrthoFinder | |
| OT_05G01890.1 | No alias | Clp protease proteolytic subunit... | 0.01 | OrthoFinder | |
| OT_09G02930.1 | No alias | Clp protease proteolytic subunit... | 0.02 | OrthoFinder | |
| OT_17G01480.1 | No alias | Clp protease proteolytic subunit... | 0.03 | OrthoFinder | |
| Sro20_g014090.1 | Contig2954.g23439 | Protease proteolytic subunit | 0.01 | OrthoFinder | |
| Sro22_g015350.1 | Contig426.g5759 | Protease proteolytic subunit | 0.02 | OrthoFinder | |
| Transcript_contig_54370 | 54370 | Clp protease proteolytic subunit... | 0.02 | OrthoFinder | |
| Vocar.0016s0150.1 | 32898204 | Clp protease proteolytic subunit... | 0.02 | OrthoFinder | |
| XM_003054761.1 | MicpuC2_12936, 12936 | Clp protease proteolytic subunit... | 0.01 | OrthoFinder | |
| lcl|BLLF01001574.1_cds_GFH20100.1_14577 | HaLaN_17169, GFH20100 | ATP-dependent Clp protease proteolytic subunit | 0.03 | OrthoFinder | |
| lcl|LHPG02000001.1_cds_PRW61527.1_10 | PRW61527 | ATP-dependent Clp protease proteolytic subunit chloroplastic | 0.02 | OrthoFinder | |
| lcl|LHPG02000012.1_cds_PRW44960.1_1979 | PRW44960 | Protease complex subunit 3 | 0.03 | OrthoFinder | |
| lcl|VRMN01000014.1_cds_KAA8491374.1_2375 | KAA8491374 | Putative ATP-dependent Clp protease proteolytic subunit-like | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Enrichment |
| MF | GO:0004129 | cytochrome-c oxidase activity | IEP | Enrichment |
| MF | GO:0004427 | inorganic diphosphatase activity | IEP | Enrichment |
| MF | GO:0005198 | structural molecule activity | IEP | Enrichment |
| MF | GO:0005261 | cation channel activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005507 | copper ion binding | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005759 | mitochondrial matrix | IEP | Enrichment |
| CC | GO:0005840 | ribosome | IEP | Enrichment |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0006412 | translation | IEP | Enrichment |
| BP | GO:0006479 | protein methylation | IEP | Enrichment |
| BP | GO:0006518 | peptide metabolic process | IEP | Enrichment |
| BP | GO:0006754 | ATP biosynthetic process | IEP | Enrichment |
| BP | GO:0006777 | Mo-molybdopterin cofactor biosynthetic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Enrichment |
| BP | GO:0008213 | protein alkylation | IEP | Enrichment |
| MF | GO:0008270 | zinc ion binding | IEP | Enrichment |
| MF | GO:0008276 | protein methyltransferase activity | IEP | Enrichment |
| MF | GO:0008324 | cation transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Enrichment |
| MF | GO:0009055 | electron transfer activity | IEP | Enrichment |
| BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| MF | GO:0015035 | protein-disulfide reductase activity | IEP | Enrichment |
| MF | GO:0015036 | disulfide oxidoreductase activity | IEP | Enrichment |
| MF | GO:0015075 | ion transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015252 | proton channel activity | IEP | Enrichment |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0015985 | energy coupled proton transport, down electrochemical gradient | IEP | Enrichment |
| BP | GO:0015986 | ATP synthesis coupled proton transport | IEP | Enrichment |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | Enrichment |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | Enrichment |
| BP | GO:0016569 | covalent chromatin modification | IEP | Enrichment |
| BP | GO:0016570 | histone modification | IEP | Enrichment |
| BP | GO:0016571 | histone methylation | IEP | Enrichment |
| MF | GO:0016624 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | IEP | Enrichment |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Enrichment |
| MF | GO:0016675 | oxidoreductase activity, acting on a heme group of donors | IEP | Enrichment |
| MF | GO:0016874 | ligase activity | IEP | Enrichment |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Enrichment |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | Enrichment |
| MF | GO:0018024 | histone-lysine N-methyltransferase activity | IEP | Enrichment |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | Enrichment |
| BP | GO:0019720 | Mo-molybdopterin cofactor metabolic process | IEP | Enrichment |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | Enrichment |
| CC | GO:0031974 | membrane-enclosed lumen | IEP | Enrichment |
| BP | GO:0032259 | methylation | IEP | Enrichment |
| CC | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0034968 | histone lysine methylation | IEP | Enrichment |
| MF | GO:0042054 | histone methyltransferase activity | IEP | Enrichment |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Enrichment |
| MF | GO:0043169 | cation binding | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043233 | organelle lumen | IEP | Enrichment |
| BP | GO:0043414 | macromolecule methylation | IEP | Enrichment |
| BP | GO:0043545 | molybdopterin cofactor metabolic process | IEP | Enrichment |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Enrichment |
| BP | GO:0043604 | amide biosynthetic process | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| CC | GO:0045261 | proton-transporting ATP synthase complex, catalytic core F(1) | IEP | Enrichment |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | Enrichment |
| MF | GO:0046872 | metal ion binding | IEP | Enrichment |
| MF | GO:0046914 | transition metal ion binding | IEP | Enrichment |
| MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | Enrichment |
| BP | GO:0051189 | prosthetic group metabolic process | IEP | Enrichment |
| CC | GO:0070013 | intracellular organelle lumen | IEP | Enrichment |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
| No external refs found! |