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  5. Cpa|evm.model.tig00021357.70

Cpa|evm.model.tig00021357.70 (tig00021357_g20794.t1)


Aliases : tig00021357_g20794.t1

Description : Ribonuclease TUDOR 1 OS=Arabidopsis thaliana


Gene families : OG_01_0002285 (OrthoFinder) Phylogenetic Tree(s): OG0002285_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021357.70
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
Cre11.g477850 30776004 RNA processing.messenger ribonucleoprotein particle... 0.04 OrthoFinder
XM_003060533.1 MicpuC2_27821, 27821 Staphylococcal nuclease (SNase-like), OB-fold; Tudor... 0.02 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492726.1_2462 KAA8492726 Ribonuclease TUDOR 2 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0004615 phosphomannomutase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
InterPro domains Description Start Stop
IPR002999 Tudor 188 264
IPR016071 Staphylococal_nuclease_OB-fold 36 119
No external refs found!