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  5. lcl|BLLF01000678.1_cds_GFH14026.1_8503

lcl|BLLF01000678.1_cds_GFH14026.1_8503 (HaLaN_09999, GFH14026)


Aliases : HaLaN_09999, GFH14026

Description : Histone H2A


Gene families : OG_01_0000046 (OrthoFinder) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000678.1_cds_GFH14026.1_8503
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
Cre06.g266700 30779158 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cre06.g268050 30779224, HTA10 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cre06.g268300 30778781, HTA9 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cre06.g271350 30779391 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cre06.g273900 30779778 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cre06.g274200 30778751 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cre06.g274800 30780111, HTA26 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cre06.g275850 30779335 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cre06.g276500 30778822, HTA23 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cre06.g276950 30778754, HTA24 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cre12.g504750 30792225 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cre12.g505550 30793129 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cre12.g506250 30793152, HTA18 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cre17.g708550 30781878, HTA20 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cre17.g709200 30782358 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cre17.g711700 30781638, HTA5 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cre17.g713400 30781819 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder
Cz05g04180.t1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
Cz07g08180.t1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
Cz08g27130.t1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
Cz18g11100.t1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
Dusal.0002s00036.1 33187941 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.05 OrthoFinder
Dusal.0152s00023.1 33186201 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
Dusal.0322s00015.1 33197808 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
lcl|VRMN01000010.1_cds_KAA8492219.1_5402 KAA8492219 Histone H2A.V 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006810 transport IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
InterPro domains Description Start Stop
IPR032454 Histone_H2A_C 101 134
IPR007125 Histone_H2A/H2B/H3 19 98
IPR018108 Mitochondrial_sb/sol_carrier 169 257
IPR018108 Mitochondrial_sb/sol_carrier 135 171
No external refs found!