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  5. lcl|BLLF01000649.1_cds_GFH13758.1_8235

lcl|BLLF01000649.1_cds_GFH13758.1_8235 (HaLaN_09703, GFH13758)


Aliases : HaLaN_09703, GFH13758

Description : Slu7 domain-containing protein


Gene families : OG_01_0003323 (OrthoFinder) Phylogenetic Tree(s): OG0003323_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000649.1_cds_GFH13758.1_8235
Cluster HCCA: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
Cre03.g194000 30787426 Pre-mRNA-splicing factor SLU7 OS=Oryza sativa subsp. indica 0.02 OrthoFinder
Cz01g38130.t1 No alias Pre-mRNA-splicing factor SLU7 domain [Interproscan]. 0.02 OrthoFinder
EOD41716 No alias Pre-mRNA-splicing factor SLU7 domain [Interproscan]. 0.04 OrthoFinder
OT_14G00940.1 No alias Pre-mRNA-splicing factor SLU7 domain [Interproscan]. 0.02 OrthoFinder
PTI_11G03440.1 No alias Pre-mRNA-splicing factor SLU7 domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_54973 54973 Pre-mRNA-splicing factor SLU7 domain [Interproscan]. 0.02 OrthoFinder
XM_002505750.1 MICPUN_63712, 63712 Pre-mRNA-splicing factor SLU7 domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Enrichment
MF GO:0005049 nuclear export signal receptor activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006098 pentose-phosphate shunt IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006740 NADPH regeneration IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0031491 nucleosome binding IEP Enrichment
BP GO:0043044 ATP-dependent chromatin remodeling IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0051156 glucose 6-phosphate metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR021715 Slu7_dom 356 615
No external refs found!