1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00021357.40

Cpa|evm.model.tig00021357.40 (tig00021357_g20766.t1)


Aliases : tig00021357_g20766.t1

Description : Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana


Gene families : OG_01_0002755 (OrthoFinder) Phylogenetic Tree(s): OG0002755_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021357.40
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Cre08.g373250 30773949, POA2 Protein degradation.26S proteasome.20S core... 0.21 OrthoFinder
Cz05g10060.t1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.11 OrthoFinder
Dusal.0724s00005.1 33190221 Proteasome, subunit alpha/beta; Proteasome... 0.02 OrthoFinder
EOD39539 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.1 OrthoFinder
OT_06G00220.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.09 OrthoFinder
PTI_25G01000.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.05 OrthoFinder
Sro63_g035860.1 Contig2778.g22351 Proteasome subunit alpha 0.18 OrthoFinder
TP22G01710.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.12 OrthoFinder
Transcript_contig_58673 58673 Proteasome alpha-subunit, N-terminal domain; Proteasome,... 0.02 OrthoFinder
Vocar.0043s0030.1 32886890 Proteasome alpha-subunit, N-terminal domain; Proteasome,... 0.08 OrthoFinder
XM_002500738.1 MICPUN_56599, 56599 Proteasome, subunit alpha/beta [Interproscan]. 0.13 OrthoFinder
XM_003059320.1 MicpuC2_49610, 49610 Proteasome, subunit alpha/beta [Interproscan]. 0.09 OrthoFinder
lcl|BLLF01002018.1_cds_GFH22338.1_16815 HaLaN_19789, GFH22338 Proteasome subunit alpha type 0.03 OrthoFinder
lcl|LHPG02000012.1_cds_PRW44892.1_1655 PRW44892 20S proteasome alpha subunit B 0.06 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498323.1_7276 KAA8498323 Proteasome subunit alpha type-2-A 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA Interproscan
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004618 phosphoglycerate kinase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030118 clathrin coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030125 clathrin vesicle coat IEP Enrichment
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 83 179
IPR000426 Proteasome_asu_N 5 27
No external refs found!